Protein Alignment atms and PAF1

DIOPT Version :9

• Sequence 1: NP_001262263.1
• Gene: atms / 40593
• FlyBaseID: FBgn0010750
• Length: 538
• Species: Drosophila melanogaster
• Sequence 2: NP_009838.1
• Gene: PAF1 / 852582
• SGDID: S000000483
• Length: 445
• Species: Saccharomyces cerevisiae
• Alignment Length: 448
• Identity: 103/448 - (22%)
• Similarity: 175/448 - (39%)
• Gaps: 123/448 - (27%)

  Fly    24 RKSEIICRVKYGNNLPDIPFDLKFLQYP------FDSHRFVQYNPTSLERNFKYDVLTEHDLGVT 82
            :|.|.|..:||.|:||......|.|.||      .||.:.:  |...::.|....:..:.|||:.
Yeast     3 KKQEYIAPIKYQNSLPVPQLPPKLLVYPESPETNADSSQLI--NSLYIKTNVTNLIQQDEDLGMP 65

  Fly    83 VDLI----------NRELYQADSMTLLDPADEKLLEE---ETLTPTDSVRSRQHSRTVSWLRKSE 134
            |||:          ::.||..|::. ||..|..||.:   :.||.||..:       |::||::|
Yeast    66 VDLMKFPGLLNKLDSKLLYGFDNVK-LDKDDRILLRDPRIDRLTKTDISK-------VTFLRRTE 122

  Fly   135 YISTEQTRFQPQNLENIEAKVGYNVKKSLR-----EETLYLDREAQIKAIEKTFSDTKSEITKHY 194
            |:|           ..|.|....::|:..|     .:...||....|..:|.||:  |::..:|.
Yeast   123 YVS-----------NTIAAHDNTSLKRKRRLDDGDSDDENLDVNHIISRVEGTFN--KTDKWQHP 174

  Fly   195 SKPNVVPVEVLPIFPDFTNWKFPCAQVIF-------------DSDPAPAGKNVPAQLEEMSQAMI 246
            .|..|..|:...:.||..:..    ||.|             :......|...|.:|||
Yeast   175 VKKGVKMVKKWDLLPDTASMD----QVYFILKFMGSASLDTKEKKSLNTGIFRPVELEE------ 229

  Fly   247 RGVMDESGEQFVAYFLPTEQTLEKRRTDFINGELYKEEEEYE--------YKIAREYNWNVKTKA 303
                    :::::.:     ..:.:.:..:..||.|..:|.:        ||..|..::::|..|
Yeast   230 --------DEWISMY-----ATDHKDSAILENELEKGMDEMDDDSHEGKIYKFKRIRDYDMKQVA 281

  Fly   304 SKGYEENYFFVMRQDGI-YYNELETRVRLNKRRVKVGQQPNNTKLVVKHRPLDSMEHRMQRYRER 367
            .|...|....:..:||| ||..|.:::.|.:|||.     :..|.:||...:|.:...::....:
Yeast   282 EKPMTELAIRLNDKDGIAYYKPLRSKIELRRRRVN-----DIIKPLVKEHDIDQLNVTLRNPSTK 341

  Fly   368 QL-------------------EVPGEEEEIVEEVREE-------EQMQIIGETEKTSE 399
            :.                   |...|:||..|:|::|       |..:..||.||..|
Yeast   342 EANIRDKLRMKFDPINFATVDEEDDEDEEQPEDVKKESEGDSKTEGSEQEGENEKDEE 399

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
atms	NP_001262263.1	Paf1	27..414	CDD:281915	102/445 (23%)
PAF1	NP_009838.1	Paf1	8..415	CDD:397885	101/443 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG2478
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	62	1.000	Inparanoid score	I1766
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG55946
OrthoFinder	1	1.000	-	-		FOG0004172
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_104057
Panther	1	1.100	-	-	LDO	PTHR23188
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R886
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	9	8.900