Protein Alignment atms and Paf1

DIOPT Version :10

• Sequence 1: NP_649493.1
• Gene: atms / 40593
• FlyBaseID: FBgn0010750
• Length: 538
• Species: Drosophila melanogaster
• Sequence 2: NP_062331.2
• Gene: Paf1 / 54624
• MGIID: 1923988
• Length: 535
• Species: Mus musculus
• Alignment Length: 544
• Identity: 273/544 - (50%)
• Similarity: 334/544 - (61%)
• Gaps: 18/544 - (3%)

  Fly     1 MPPTINNSAVNSAAEKRP--QRQTERKSEIICRVKYGNNLPDIPFDLKFLQYPFDSHRFVQYNPT 63
            |.|||...|...... ||  .|....:|.::|||||.|:|||||||.||:.||||.:|||||..|
Mouse     1 MAPTIQTQAQREDGH-RPNSHRTLPERSGVVCRVKYCNSLPDIPFDPKFITYPFDQNRFVQYKAT 64

  Fly    64 SLERNFKYDVLTEHDLGVTVDLINRELYQADSMTLLDPADEKLLEEETLTPTDSVRSRQHSRTVS 128
            |||:..|:|:|||.|||||:||||.:.|:.|...|||||||||||||...||.|.||:||::.|.
Mouse    65 SLEKQHKHDLLTEPDLGVTIDLINPDTYRIDPNVLLDPADEKLLEEEIQAPTSSKRSQQHAKVVP 129

  Fly   129 WLRKSEYISTEQTRFQPQNLENIEAKVGYNVKKSLREETLYLDREAQIKAIEKTFSDTKSEITKH 193
            |:||:||||||..|:...| |..|.|:|.:||:...||.:|.||::||.||||||.|.:..|::|
Mouse   130 WMRKTEYISTEFNRYGISN-EKPEVKIGVSVKQQFTEEEIYKDRDSQITAIEKTFEDAQKSISQH 193

  Fly   194 YSKPNVVPVEVLPIFPDFTNWKFPCAQVIFDSDPAPAGKNVPAQLEEMSQAMIRGVMDESGEQFV 258
            ||||.|.||||:|:||||..|..|||||||||||||...:..|.||.||||||||:|||.|.|||
Mouse   194 YSKPRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPKDTSGAAALEMMSQAMIRGMMDEEGNQFV 258

  Fly   259 AYFLPTEQTLEKRRTDFINGELYKEEEEYEYKIAREYNWNVKTKASKGYEENYFFVMRQ-DGIYY 322
            |||||.|:||:||:.|......|..::.|:||||||||||||.||||||||||||:.|: ||:||
Mouse   259 AYFLPVEETLKKRKRDQEEEMDYAPDDVYDYKIAREYNWNVKNKASKGYEENYFFIFREGDGVYY 323

  Fly   323 NELETRVRLNKRRVKVG-QQPNNTKLVVKHRPLDSMEHRMQRYRERQLE--VPGEEEEIVEEVRE 384
            |||||||||:|||.|.| |...|..||||||.::..|...|..|:.|||  .|.||||...|..|
Mouse   324 NELETRVRLSKRRAKAGVQSGTNALLVVKHRDMNEKELEAQEARKAQLENHEPEEEEEEEMEAEE 388

  Fly   385 EEQMQIIGETEKTSEDAAVGAQ-AASGADSPAQVARDRQSRSRSRTRSGSSSGSGSGSGSRASSR 448
            :|......|.||.|.....|:: ..||::|      ||:...|......|.||....|...|.:.
Mouse   389 KEAGGSDEEQEKGSSSEKEGSEDEHSGSES------DREEGDRDEASDKSGSGEDESSEDEARAA 447

  Fly   449 SKSGSRSGSGSRSRTNSPAGSQKSGSRSRSVSRSRSRSKSGSRSRSRSRSKSGSRSRSGSRSGSG 513
            .......||.:.|..::.:..:..|...|...........|...||||:|:|.|||.|...|||
Mouse   448 RDKEEIFGSDADSEDDADSDDEDRGQAHRGSDNDSDSGSDGGGQRSRSQSRSRSRSASPFPSGS- 511

  Fly   514 SRSPSRSRSGSPSGSGSSSGSASD 537
              ..|....||.:.:..||.:.||
Mouse   512 --EHSAQEDGSEAAASDSSEADSD 533

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
atms	NP_649493.1	Paf1	29..413	CDD:397885	229/388 (59%)
Paf1	NP_062331.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..23		8/22 (36%)
		Paf1	30..443	CDD:397885	237/419 (57%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	361..535		55/182 (30%)