Protein Alignment atms and Paf1

DIOPT Version :10

• Sequence 1: NP_649493.1
• Gene: atms / 40593
• FlyBaseID: FBgn0010750
• Length: 538
• Species: Drosophila melanogaster
• Sequence 2: XP_063122479.1
• Gene: Paf1 / 361531
• RGDID: 1306219
• Length: 560
• Species: Rattus norvegicus
• Alignment Length: 563
• Identity: 272/563 - (48%)
• Similarity: 339/563 - (60%)
• Gaps: 31/563 - (5%)

  Fly     1 MPPTINNSAVNSAAEKRP--QRQTERKSEIICRVKYGNNLPDIPFDLKFLQYPFDSHRFVQYNPT 63
            |.|||...|...... ||  .|....:|.::|||||.|:|||||||.||:.||||.:|||||..|
  Rat     1 MAPTIQTQAQREDGH-RPNSHRTLPERSGVVCRVKYCNSLPDIPFDPKFITYPFDQNRFVQYKAT 64

  Fly    64 SLERNFKYDVLTEHDLGVTVDLINRELYQADSMTLLDPADEKLLEEETLTPTDSVRSRQHSRTVS 128
            |||:..|:|:|||.|||||:||||.:.|:.|...|||||||||||||...||.|.||:||::.|.
  Rat    65 SLEKQHKHDLLTEPDLGVTIDLINPDTYRIDPNVLLDPADEKLLEEEIQAPTSSKRSQQHAKVVP 129

  Fly   129 WLRKSEYISTEQTRFQPQNLENIEAKVGYNVKKSLREETLYLDREAQIKAIEKTFSDTKSEITKH 193
            |:||:||||||..|:...| |..|.|:|.:||:...||.:|.||::||.||||||.|.:..|::|
  Rat   130 WMRKTEYISTEFNRYGISN-EKPEVKIGVSVKQQFTEEEIYKDRDSQITAIEKTFEDAQKSISQH 193

  Fly   194 YSKPNVVPVEVLPIFPDFTNWKFPCAQVIFDSDPAPAGKNVPAQLEEMSQAMIRGVMDESGEQFV 258
            ||||.|.||||:|:||||..|..|||||||||||||...:..|.||.||||||||:|||.|.|||
  Rat   194 YSKPRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPKDTSGAAALEMMSQAMIRGMMDEEGNQFV 258

  Fly   259 AYFLPTEQTLEKRRTDFINGELYKEEEEYEYKIAREYNWNVKTKASKGYEENYFFVMRQ-DGIYY 322
            |||||.|:||:||:.|......|..::.|:||||||||||||.||||||||||||:.|: ||:||
  Rat   259 AYFLPVEETLKKRKRDQEEEMDYAPDDVYDYKIAREYNWNVKNKASKGYEENYFFIFREGDGVYY 323

  Fly   323 NELETRVRLNKRRVKVG-QQPNNTKLVVKHRPLDSMEHRMQRYRERQLEVPGEEEEIVEEVREEE 386
            |||||||||:|||.|.| |...|..||||||.::..|...|..|:.|||....|||..||:..||
  Rat   324 NELETRVRLSKRRAKAGVQSGTNALLVVKHRDMNEKELEAQEARKAQLENHEPEEEEEEEMEAEE 388

  Fly   387 Q------MQII--------GETEKTSEDAAVGAQAASGADSPAQVARDRQSRSRS------RTRS 431
            :      ..::        |:...||.......:...|:.|..:.:.|.:|.|.|      |..:
  Rat   389 KEAGGSGKGLVTSWEPWEGGQWNLTSAYFLTDEEHEKGSSSEKEGSEDERSGSESDREEGDRDEA 453

  Fly   432 GSSSGSGSGSGSRASSRSKSGSRS--GSGSRSRTNSPAGSQKSGSRSRSVSRSRSRSKSGSRSRS 494
            ...||||....|...:|:......  ||.:.|..::.:..:..|...|...........|...||
  Rat   454 SDKSGSGEDESSEDEARAARDKEEIFGSDADSEDDADSDDEDRGQAHRGSDNDSDSGSDGGGQRS 518

  Fly   495 RSRSKSGSRSRSGSRSGSGSRSPSRSRSGSPSGSGSSSGSASD 537
            ||:|:|.|||.|...|||   ..|....||.:.:..||.:.||
  Rat   519 RSQSRSRSRSASPFPSGS---EHSAQEDGSEAAASDSSEADSD 558

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
atms	NP_649493.1	Paf1	29..413	CDD:397885	225/399 (56%)
Paf1	XP_063122479.1	None