Protein Alignment atms and pafo-1

DIOPT Version :9

• Sequence 1: NP_001262263.1
• Gene: atms / 40593
• FlyBaseID: FBgn0010750
• Length: 538
• Species: Drosophila melanogaster
• Sequence 2: NP_505925.1
• Gene: pafo-1 / 179583
• WormBaseID: WBGene00008338
• Length: 425
• Species: Caenorhabditis elegans
• Alignment Length: 430
• Identity: 133/430 - (30%)
• Similarity: 234/430 - (54%)
• Gaps: 19/430 - (4%)

  Fly    18 PQRQTE-------RKSEIICRVKYGNNLPDIPFDLKFLQYPF-DSHRFVQYNPTSLERNFKYDVL 74
            ||..::       ||.:.:.:.::.|.:||:|||.||:..|| ...|||::.|.::.|::|:.|:
 Worm     2 PQESSDAKRIEPPRKVDFMLKPRFTNTVPDVPFDAKFMTCPFVPLGRFVEFQPAAIYRDYKHAVI 66

  Fly    75 TEHDLGVTVDLINRELYQADSM-TLLDPADEKLLEEETLTPTDSVRSRQHSRTVSWLRKSEYIST 138
            .:.|:|:.||||:.:.|..|.: |.:|..|..|||::......:.||:|||:.|.|:||:|||||
 Worm    67 CDDDMGLNVDLIDLKKYDEDPIETEIDEKDNILLEDDGAAKLIAKRSQQHSKLVPWMRKTEYIST 131

  Fly   139 EQTRFQPQNLENIEAKVGYNVKKSLREETLYLDREAQIKAIEKTFSDTKSEITKHYSKPNVVPVE 203
            |..|| ....:..|.|:|||:||:.:.|.:|.|:::||.||.|||.|.:..:.:||||..|..||
 Worm   132 EFNRF-GVTADRQETKLGYNLKKNQQVEDMYRDKQSQIDAINKTFEDVRKPVKEHYSKKGVKAVE 195

  Fly   204 VLPIFPDFTNWKFPCAQVIFDSDPAPAGKNVPAQLEEMSQAMIRGVMDESGEQFVAYFLPTEQTL 268
            ...:||||.:||...|.|.||.|..........:.::..::.:...|:...::|.|.|:||...|
 Worm   196 ESFVFPDFDHWKHLFAHVQFDGDTITTEFEEEDERQQARESSVIKAMEFEDQKFAAVFVPTIGCL 260

  Fly   269 EKRRTDFINGELYKEEEEYEYKIAREYNWNVKTKASKGYEENYFFVMRQDGIY-YNELETRVRLN 332
            .....|......:.|:.:||:.::|||.:.::....:  :.:.|.:..::.:: |||::..|::.
 Worm   261 TSFMDDLELERPFDEDMKYEFLLSREYTFKMEHLPPR--DRDVFIMYHRNNVFQYNEVDCNVKMT 323

  Fly   333 KRRVKVGQQPNNTKLVVKHRPLDSMEHRMQRYRERQL-EVP-GEEEEIVEEVREEEQMQIIGETE 395
             |:.|:... ..:||.:.:|....:|.:....||.:| |.| ..::||:|:::|:::..  |::.
 Worm   324 -RKPKMALS-RKSKLTLTYRNPSELEQKDMNKREAELYEQPKTRKQEILEKIQEKKEEG--GDSS 384

  Fly   396 KTSEDAAVGAQAASGADSPAQVARDRQSRSRSRTRSGSSS 435
            ..|.|:.......|.:||.:.|:.|..|..:......|.|
 Worm   385 DQSSDSDDDKPQKSRSDSSSDVSSDDDSPRKKEPTVDSDS 424

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
atms	NP_001262263.1	Paf1	27..414	CDD:281915	123/391 (31%)
pafo-1	NP_505925.1	Paf1	18..425	CDD:281915	129/414 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160165767
Domainoid	1	1.000	209	1.000	Domainoid score	I1662
eggNOG	1	0.900	-	-		E1_KOG2478
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H5441
Inparanoid	1	1.050	212	1.000	Inparanoid score	I2358
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG55946
OrthoDB	1	1.010	-	-		D418810at33208
OrthoFinder	1	1.000	-	-		FOG0004172
OrthoInspector	1	1.000	-	-		oto17333
orthoMCL	1	0.900	-	-		OOG6_104057
Panther	1	1.100	-	-	LDO	PTHR23188
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R886
SonicParanoid	1	1.000	-	-		X5214
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	16	15.800