DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG44098 and OCT4

DIOPT Version :10

Sequence 1:NP_001262264.1 Gene:CG44098 / 40590 FlyBaseID:FBgn0264907 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_188702.2 Gene:OCT4 / 821613 AraportID:AT3G20660 Length:526 Species:Arabidopsis thaliana


Alignment Length:583 Identity:132/583 - (22%)
Similarity:225/583 - (38%) Gaps:168/583 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 KMQTKVDAVGQ-----------ITGPWGKWQLRTVLLIFLCKIPSSWFMACIIFTAPAPRHGEFF 254
            |:..|.:|.|:           ..|.:|:|||:..:|            .||.:..      |.|
plant    19 KIPVKKEAEGEERLCIDEMLQRYCGEFGRWQLKHFVL------------TCIAWAL------EAF 65

  Fly   255 CKPPHT---IGAQNQTQWIKVSHPQKEESDDQEFSIDFCNVYQDAQEHAHHYYNYENSDQEPRVW 316
                ||   |.|..:.:|..|.      ||.:..|:                    |.:.:|..|
plant    66 ----HTMVMIFADQEPEWRCVG------SDCRVGSL--------------------NCELDPSSW 100

  Fly   317 EKPLHRNSNVIPCTEFQHESDYHSVVTQYDLVCSRDILVSVTQFFHLFGVLTG----GILANQLL 377
            |....:.|               |.|:::.|:|.....|.:.|.....|.:.|    |.|::..|
plant   101 EWTAGKGS---------------STVSEWGLICGDKYKVGLVQALFFAGCMIGAGVFGHLSDSKL 150

  Fly   378 KYFSPRNVMLFGMITQIFCGNLTGHVASYELHVFFRCLSAVCCAQMYTAGGQ-----IMADITGG 437
            .......|:.  :|..|| |..|....:|..:|..|.|:.      ::.||.     ::|....|
plant   151 GRKGSLTVVC--IINAIF-GIATAFSPNYWTYVVLRFLTG------FSTGGVGLTAFVLATEPIG 206

  Fly   438 KYRTCV---STLFEQFWSIGVMMLPGVASFWSSWSHLYMAISWPTVI-LIYLWQWIPDSPRWLIA 498
            ..:..|   ||.:  |:|.|:.:|.|:|..:.||..|::..|.|::: |:.:..:|.:||||.:.
plant   207 PSKRGVAGMSTFY--FFSAGIAVLSGIAYVFRSWRELFIVSSLPSLLFLLIVIPFISESPRWYLV 269

  Fly   499 RGRTQDAKKILLECVEVNGTGYNLPHDIDQQLELQAQTAMDAPPPSGWWSMWKGER--------- 554
            ||:..:|.|::....:.||.  ::|..:...|:...:..             .|||         
plant   270 RGKVDEAMKLMHSIAKTNGR--HIPAGVTLALDDDVENN-------------NGERNTAVEGSLK 319

  Fly   555 --------AVRHIVCVHLAWSLYIVVYYGMLLNIRSFSRDHLYINTFFAGFSEMMGTFFGLFLIL 611
                    .:|.::.|.:::::.| ||||:.||:.:. :.:||:|.|....|||........|:.
plant   320 DVILSPLMRMRLVISVAISFTVSI-VYYGLSLNVGNL-KTNLYLNVFVNAVSEMPAFAITAVLLD 382

  Fly   612 KTTRKWLWTGL--FNIVAGCIAYCGWLVPKPSVIGLDPNVALLMCSAMVSKMAISTTLSILTTCT 674
            |..||.|..|.  |:.|...:.:..|        |..|..::.|.|.::....::.|.::|....
plant   383 KYGRKPLSIGTQWFSCVFCLVGFSVW--------GAGPWKSVRMVSGVLGIFGMAGTYNLLFIYI 439

  Fly   675 VELVSDDKKKITSFSTI-------CWARFWLLG---APFIGSTVVFGQLIPQTAFASLAILGG 727
            .||          |.|:       |..:...:|   |||:   ||.|:.:|...||...::||
plant   440 AEL----------FPTVVRNAALGCATQAAQMGAILAPFV---VVLGEELPFGVFAVCGLVGG 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG44098NP_001262264.1 MFS_SLC22 329..732 CDD:340875 104/441 (24%)
OCT4NP_188702.2 MFS_OCT_plant 90..496 CDD:340936 110/484 (23%)

Return to query results.
Submit another query.