DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG44098 and Svopl

DIOPT Version :9

Sequence 1:NP_001262264.1 Gene:CG44098 / 40590 FlyBaseID:FBgn0264907 Length:813 Species:Drosophila melanogaster
Sequence 2:XP_008761085.2 Gene:Svopl / 500085 RGDID:1566053 Length:446 Species:Rattus norvegicus


Alignment Length:464 Identity:105/464 - (22%)
Similarity:169/464 - (36%) Gaps:118/464 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 SNVIPCTEFQHESDYHSVVTQYDLVCSRDILVSVTQFFHLFGVLTGGILANQLLKYFSPRNVMLF 388
            |.||.| |:|.|:...:.||              |..|  ||.:...||...|...:....::|.
  Rat    24 SPVIRC-EWQLENWQVAFVT--------------TMVF--FGYMVSSILFGLLADRYGRWKILLL 71

  Fly   389 GMITQIFCGNLTGHVASYELHVFFRCLSAVCCAQMYTAGGQIMADITGGKYRTCVSTLFEQFWSI 453
            ..:...:...||....||...||.|.:.. |....:..|..|..:....|||..:..|.:.||..
  Rat    72 SFLWGAYFSLLTSFSPSYIWFVFLRTMVG-CGVSGHAQGLIIKTEFLPTKYRGYMLPLSQVFWLA 135

  Fly   454 GVMMLPGVASF---WSSWSHLYMAISWPTVILIYLWQWIPDSPRWLIARGRTQDAKKILLECVEV 515
            |.:::..:||.   ...|..|....|.|.:|||..:::||:|.|:.::.|.||.|...|....::
  Rat   136 GSLLIISMASVVIPTIGWRWLIRIASIPGIILIMAFKFIPESARFNVSTGNTQAALDTLESIAKM 200

  Fly   516 NGTGYNLPHDIDQQLELQAQTA--MDAPPPSGWWSMWKGERAVRHIVCVHLAWSLYIVVYYGMLL 578
            |.:.......::..||.:.:.|  :::             :.:|..:.:.:.|......|||::|
  Rat   201 NRSVMPEGRLVEPILEKRGRFADLLES-------------KYLRTTLQIWIIWLGISFAYYGVIL 252

  Fly   579 -NIRSFSRD-----------------------------HL-----YINTFFAGFSE-------MM 601
             :.....||                             |:     |.....:...|       ::
  Rat   253 ASAELLERDLVCGSKSESEPEVVENMGDAEEGRSPCYCHMFAPSDYRTMIISTLGEIALNPLNIL 317

  Fly   602 G-TFFGLFLILKTTRKWLWTGLFNIVAG-CIAYCGWLVPKPSVIGLDPNVALLMCSAMVSKMAIS 664
            | .|.|..|.|..|..  .|.||.::.. |.:..|       :||.     |.|..|:|:  |..
  Rat   318 GINFLGRRLSLSITMG--CTALFFLLLNICTSSAG-------LIGF-----LFMLRALVA--ANF 366

  Fly   665 TTLSILTTCTVELVSDDKKKI---TSFSTICWARFWLLGAPFIGSTVVFGQLIPQTAFASLAILG 726
            .|:.|.   |.|:.....:.:   || .::|  |...:.||||...::           |.:.||
  Rat   367 NTIYIY---TAEVYPTPMRALGMGTS-GSLC--RIGAMVAPFISQVLM-----------SASFLG 414

  Fly   727 GLCTSLISS 735
            .||  |.||
  Rat   415 ALC--LFSS 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG44098NP_001262264.1 2A0119 214..730 CDD:273328 101/457 (22%)
MFS 353..733 CDD:119392 93/431 (22%)
SvoplXP_008761085.2 MFS_SVOPL 3..434 CDD:341000 105/464 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347058
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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