DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG44098 and CarT

DIOPT Version :9

Sequence 1:NP_001262264.1 Gene:CG44098 / 40590 FlyBaseID:FBgn0264907 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster


Alignment Length:614 Identity:137/614 - (22%)
Similarity:243/614 - (39%) Gaps:149/614 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 DTFAQLEGKAPKPNTKMQTKVDAVGQI------TGPWGKWQLRTVLLIFLCKIPSSWFMACI--- 241
            |.:.:|.....:...:.|..||....:      .|.:||:|   .||:|...:|     |||   
  Fly    10 DEYDELSELRQRHKPESQPSVDEAFDLDDLLPTIGEFGKYQ---KLLVFGICLP-----ACIPCG 66

  Fly   242 ------IFTAPAPRHGEFFCKPPHTIGAQNQTQWIKVSHPQKEESDDQEFS------IDFCNVYQ 294
                  :|.|..|  .:::|:.|..:....: |...:|.|::.::|:..:|      :::..:.:
  Fly    67 FCAFNQLFMADTP--DDYWCRIPELLDLPLE-QRKSLSIPKELDNDELVYSKCYTYGVNWTQLLE 128

  Fly   295 DAQEHAHHYYNYENSDQEPRV-WEKPLHRNSNVIPCT---EFQHESDYHSVVTQYDLVCSRDILV 355
            ..:|.       :.:..||.. |  ||      |.|.   |:.....:.|:|..:||||.:||..
  Fly   129 SGEED-------DLTTMEPNASW--PL------IKCPQGWEYNTSVVWSSIVIDFDLVCDQDIYP 178

  Fly   356 SVTQFFHLFGVLTGGILANQLLKYFSPRNVMLFGMITQIFCGNLTGHVASYELHVFFRCLSAVCC 420
            ::    .|..:.|||           |..|.|||::     .:..|...||     |.||:.:..
  Fly   179 TI----GLAALNTGG-----------PVGVYLFGLL-----NDRGGRRLSY-----FVCLATLLA 218

  Fly   421 AQMYT---------AGGQIMADIT----------------GGKYRTCVSTLFEQFWSIGVMMLPG 460
            ..:.|         ||.:::..:|                |..||:.|:.:...|::.|:|:|.|
  Fly   219 GSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTSGIMLLSG 283

  Fly   461 VASFWSSWSHLYMAISWPTVILIYLWQWI-PDSPRWLIARGRTQDAKKILLECVEVNGTGYNLPH 524
            |......|..|....|.| ....:|:.:: |:|||||:.|||.::|.|||....:|||..:  |.
  Fly   284 VTYLERDWVRLSYITSLP-FYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGREF--PE 345

  Fly   525 DIDQQLELQAQTAMDAPPPSGWWSMWKGERAVRHI---------------VCVHLAW----SLYI 570
            .:  .|:|:||...|        .:.|.::.:.::               :.:.|:|    ::|:
  Fly   346 AV--HLKLEAQIRRD--------KLKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANETVYL 400

  Fly   571 -VVYYGMLLNIRSFSRDHLYINTFFAGFSEMMGTFFGLFLILKTTRKWLWTGLFNIVAGCIAYCG 634
             :.|||..|....      |::.|.:...|:.......:.:....|:|. ..|..|:.|......
  Fly   401 GLSYYGPALGTNQ------YVSFFLSAVVELPSYLCCWYFMDTWGRRWP-LSLSMILGGVACVIT 458

  Fly   635 WLVPKPSVIGLDPNVALLMCSAMVSKMAISTTLSILTTCTVELVSDDKKKITSFSTICWARFWLL 699
            .::|..:|   |..:.|.    :|||..:|.:..|:.....||.....:.|...::.......|:
  Fly   459 VMLPDDAV---DETLVLY----LVSKALLSASFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLI 516

  Fly   700 GAPFIGSTVVFGQLIPQTAFASLAILGGL 728
            |.|||.........:|......|::|||:
  Fly   517 GIPFITYLGKDNLKLPLVIMGFLSMLGGM 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG44098NP_001262264.1 2A0119 214..730 CDD:273328 132/580 (23%)
MFS 353..733 CDD:119392 95/422 (23%)
CarTNP_610052.1 2A0119 44..561 CDD:273328 132/580 (23%)
MFS 182..551 CDD:119392 94/412 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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