DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG44098 and Slc22a3

DIOPT Version :9

Sequence 1:NP_001262264.1 Gene:CG44098 / 40590 FlyBaseID:FBgn0264907 Length:813 Species:Drosophila melanogaster
Sequence 2:NP_062103.1 Gene:Slc22a3 / 29504 RGDID:3701 Length:551 Species:Rattus norvegicus


Alignment Length:555 Identity:137/555 - (24%)
Similarity:250/555 - (45%) Gaps:65/555 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 GPWGKWQLRTVLLIFLCKIPSSWFMACIIFTAPAPRHGEFFCKPPHTIGAQNQTQWIKVSHPQKE 278
            |.:|::|.|..||:.|..:..::....::|....|.:  ::|:.|.......:..|         
  Rat    12 GEFGRFQRRVFLLLCLTGVTFAFLFVGVVFLGSQPDY--YWCRGPRATALAERCAW--------- 65

  Fly   279 ESDDQEFSIDFCNVYQDA----QEHAHHYYNYENSDQEPRVWEKPL----HRNSNVIPCT-EFQH 334
             |.::|:::....::..|    |.|.|.|. .|:::....:...||    :|::.::||: ::::
  Rat    66 -SPEEEWNLTTPELHVPAERRGQGHCHRYL-LEDTNTSSELSCDPLAAFPNRSAPLVPCSGDWRY 128

  Fly   335 ESDYHSVVTQYDLVCSRDILVSVTQFFHLFGVLTGGILANQLLKYFSPRNVMLFGMITQIFCGNL 399
            ...:.::|:|:||||....::.:||.....|.|.|..    .|.|.:.|...|...:...|...:
  Rat   129 VETHSTIVSQFDLVCGNAWMLDLTQAILNLGFLAGAF----TLGYAADRYGRLIVYLISCFGVGI 189

  Fly   400 TGHVA----SYELHVFFRCLSAVCCAQMYTAGGQIMADITGGKYRTCVSTLFEQFWSIGVMMLPG 460
            ||.|.    ::.:.|.||.|..|.....:.....|:.:|.|.|.|..|..:.:.|:::|:::|||
  Rat   190 TGVVVAFAPNFSVFVIFRFLQGVFGKGAWMTCFVIVTEIVGSKQRRIVGIVIQMFFTLGIIILPG 254

  Fly   461 VASFWSSWSHLYMAISWPT-VILIYLWQWIPDSPRWLIARGRTQDAKKILLECVEVNG----TGY 520
            :|.|..||..:.:|||.|: :.|:|.|. :|:||||||.|.:.:.|.:||....:.||    :.|
  Rat   255 IAYFTPSWQGIQLAISLPSFLFLLYYWV-VPESPRWLITRKQGEKALQILRRVAKCNGKHLSSNY 318

  Fly   521 NLPHDIDQQLELQAQTAMDAPPPSGWWSMWKGERAVRHIVCVHLAWSLYIVVYYGMLLNIRSFSR 585
            :.....|:  |:...:.:|         :.:..:..:..:.:..||....|||.|:::.: ....
  Rat   319 SEITVTDE--EVSNPSCLD---------LVRTPQMRKCTLILMFAWFTSAVVYQGLVMRL-GLIG 371

  Fly   586 DHLYINTFFAGFSEMMGTFFGLFLILKTTRKWLWTGLFNIVAGCIAYCGWLVPKPSVIGLDPNVA 650
            .:||::.|.:|..|:.|....|..|.:..|: |.....|||||........:|: .:..|...||
  Rat   372 GNLYMDFFISGLVELPGALLILLTIERLGRR-LPFAASNIVAGVSCLVTAFLPE-GIPWLRTTVA 434

  Fly   651 LLMCSAMVSKMAISTTLSILTTCTVELVSDDKKK--ITSFSTICWARFWLLGAPFIGSTVVFGQL 713
            .|      .::.|:....|:.....||.....:.  ::..|.:|  .|..:.|||:...:....|
  Rat   435 TL------GRLGITMAFEIVYLVNSELYPTTLRNFGVSLCSGLC--DFGGIIAPFLLFRLAAIWL 491

  Fly   714 -IPQTAFASLA-ILGGLCTSLISSPRTHPISRPSS 746
             :|...|..|| :.|||...|   |.|..|:.|.:
  Rat   492 ELPLIIFGILASVCGGLVMLL---PETKGIALPET 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG44098NP_001262264.1 2A0119 214..730 CDD:273328 132/537 (25%)
MFS 353..733 CDD:119392 101/392 (26%)
Slc22a3NP_062103.1 2A0119 12..523 CDD:273328 137/553 (25%)
MFS 145..513 CDD:119392 102/397 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347130
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.