DRSC/TRiP Functional Genomics Resources

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Protein Alignment BCAM and side-IV

DIOPT Version :10

Sequence 1:NP_005572.2 Gene:BCAM / 4059 HGNCID:6722 Length:628 Species:Homo sapiens
Sequence 2:NP_001034052.2 Gene:side-IV / 41657 FlyBaseID:FBgn0038156 Length:1001 Species:Drosophila melanogaster


Alignment Length:562 Identity:124/562 - (22%)
Similarity:197/562 - (35%) Gaps:128/562 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    39 PL--VEVMRGKSVILDC--TPTGTHDH-YMLEWFLTDRSGARPRLASAEMQGSEL-------QVT 91
            ||  |:.:.|:..:|.|  :|....|. ||:.||   |.|....:.:.:::|.:.       ..|
  Fly    77 PLTTVQGVLGRQAMLPCDISPQERDDAVYMVLWF---REGDGEPIYNFDVRGRQFGQARLWSSPT 138

Human    92 MHDTRGR----SPPYQLDSQGRLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEV 152
            ...||..    :.|.||.      :...::.||..|.|.|....:.|......|.|...|:...:
  Fly   139 AFGTRAHFSSTTHPAQLK------IDNIRIEDEGVYRCRVDFRNSPTRNLKINLTVIVPPDRPVI 197

Human   153 -SPNK----GTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREA 212
             ..|:    |.:....:....:.:|....|.|.|.:|||.:...::...|..|:|    :|:...
  Fly   198 YGQNRHEKAGNVESFSEGNDIVLSCEVSGGRPRPNVTWYLDNTAIDESFEQRPDG----KTINHL 258

Human   213 SGLLSLTSTLYLRLRKDDRDASFHCAA---HYSLPEGRHGRLDSPTFHLTLHYPTEHVQFWVGSP 274
            |         |..:.:...::...|.|   :.:.|..|...||.....:.:|..|:.        
  Fly   259 S---------YPNVGRQHLNSRLMCVASNTNLTPPNNRVVILDVNLKPIAVHILTKD-------- 306

Human   275 STPAGWVREGDTVQLLCRGDGSPSPEYTLFRLQDEQEEVL--NVNLEGNLTLEGVT----RGQSG 333
                .:|....|..:.|:..||..|....:....:|.:.|  |.|...|.:|..:|    |...|
  Fly   307 ----RFVSADRTYDVECKSSGSKPPALITWWKGSKQLKKLTKNFNEPDNQSLSILTFTPGREDDG 367

Human   334 TY-GCRVE----DYDAADD-----VQLSKTLELRV-AYLDPLELSEGKVLSLPLNSSAVVNCSVH 387
            .| .||.|    |..|.:|     |....|..|:: :.|:|.::.||        ..|...|.|.
  Fly   368 KYLTCRAENQFIDGSAIEDKWRLIVHYQPTTTLKIGSSLNPDDIKEG--------DDAYFECIVL 424

Human   388 GLPTP-ALRWTKDSTPL----GDGPMLS-----LSSITFDSNGTYVC-----EASLPTVPVLSRT 437
            ..|.| .:.|..:...|    ..|.:||     |.|::..|.|.|.|     |...|:.||..|.
  Fly   425 ANPKPYKMSWFHNGKELQHNISAGVILSDQSLVLQSVSRASAGDYTCLAVNSEGKGPSNPVTLRI 489

Human   438 QNFTLLVQGSPEL------KTAEIEPKADGSWREGDEVTLICSARGHPDPKLSWSQLGGSPAEPI 496
            :...:......||      :|..::.:.|.|               .|.....|:.........:
  Fly   490 RYAPICATDHEELLGALKHETLPLKCEVDSS---------------PPADSFQWTFNSSGEQTEL 539

Human   497 PGRQGWVSSSLT----LKVTSALSRD--GISCEASNPHGNKR 532
            |.|   :.||.|    |..|.:...|  .|||.|.|..|.::
  Fly   540 PAR---LHSSETGMSRLNYTPSTDLDYGTISCWAKNSIGTQK 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BCAMNP_005572.2 V-set 37..143 CDD:462230 28/119 (24%)
C2-set_2 151..248 CDD:400489 18/104 (17%)
Ig strand C 182..186 CDD:409416 1/3 (33%)
IG_like 280..358 CDD:214653 25/93 (27%)
Ig strand B 287..291 CDD:409353 0/3 (0%)
Ig strand C 300..304 CDD:409353 0/3 (0%)
Interaction with laminin alpha5 309..312 1/2 (50%)
Ig strand E 320..324 CDD:409353 1/3 (33%)
Ig strand F 334..339 CDD:409353 2/5 (40%)
Ig_2 363..437 CDD:464026 23/88 (26%)
Ig_3 464..526 CDD:464046 14/67 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 579..628
side-IVNP_001034052.2 V-set 79..188 CDD:462230 26/117 (22%)
Ig 210..281 CDD:472250 15/83 (18%)
Ig strand B 218..222 CDD:409353 0/3 (0%)
Ig strand C 232..236 CDD:409353 1/3 (33%)
Ig <317..392 CDD:472250 20/74 (27%)
Ig strand C 329..333 CDD:409353 0/3 (0%)
Ig strand E 355..359 CDD:409353 0/3 (0%)
Ig strand F 369..374 CDD:409353 2/4 (50%)
Ig strand G 385..388 CDD:409353 1/2 (50%)
Ig 411..479 CDD:472250 19/75 (25%)
Ig strand B 417..421 CDD:409353 1/3 (33%)
Ig strand C 431..435 CDD:409353 0/3 (0%)
Ig strand E 454..458 CDD:409353 0/3 (0%)
Ig strand F 468..473 CDD:409353 2/4 (50%)
Ig 494..576 CDD:472250 20/99 (20%)
Ig strand B 511..515 CDD:409353 0/3 (0%)
Ig strand C 525..529 CDD:409353 0/3 (0%)
Ig strand E 551..555 CDD:409353 1/3 (33%)
Ig strand F 566..570 CDD:409353 3/3 (100%)
fn3 593..675 CDD:394996
Blue background indicates that the domain is not in the aligned region.

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