DRSC/TRiP Functional Genomics Resources

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Protein Alignment BCAM and side-II

DIOPT Version :10

Sequence 1:NP_005572.2 Gene:BCAM / 4059 HGNCID:6722 Length:628 Species:Homo sapiens
Sequence 2:NP_001400995.1 Gene:side-II / 3346206 FlyBaseID:FBgn0259213 Length:1067 Species:Drosophila melanogaster


Alignment Length:574 Identity:124/574 - (21%)
Similarity:206/574 - (35%) Gaps:117/574 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    41 VEVMRGKSVILDCTPTGTHDH-YMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPP--- 101
            ::.:.||||.|.|..|...|: ||:.||   |..|...|.|.:::..|   :....|..|.|   
  Fly    57 IDAVEGKSVSLPCPITEPLDNVYMVLWF---RDNAGIPLYSFDVRDKE---SREQPRHWSAPEVF 115

Human   102 -----YQLDSQ-GRLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKG--- 157
                 :..||| ..|.:.:.:..|:..|.|.|....:.|......|:|...||...:....|   
  Fly   116 GSRAKFHFDSQPATLEIKDIKRHDQGIYRCRVDFRTSQTQSFRFNLSV
IILPEQPIIMDRWGRQL 180

Human   158 ---TLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLT 219
               .|...::....:.||....|.|.|::.|..||..::...|.|             ||.:...
  Fly   181 NGTQLGPKQEGDDIVITCRVVGGRPQPQVRWLVNGLLVDNQNEHN-------------SGDVIEN 232

Human   220 STLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSP---TFHLTLHYPTEHVQFWVGSPSTPAGWV 281
            ..|:..::::|.::.|.|.|       .:.:||.|   :|.|.:|.....|:..    ..|:..:
  Fly   233 RLLWPSVQRNDLNSVFTCQA-------LNTQLDKPKEKSFILDMHLKPLVVKIL----EPPSSMI 286

Human   282 REGDTVQLLCRGDGS-PSPEYTLFR----LQDEQEEVLNVNLEGNLTLEGVTRGQSGTYGCRVED 341
            .: ...::.|...|| |:...|.::    |:..::::...:....|:....|.....:..||.|:
  Fly   287 AD-RRYEVSCESSGSRPNAIITWYKGKRQLRRTKDDISKNSTRSELSFVPTTDDDGKSITCRAEN 350

Human   342 YDAADDVQLSKTLELRVAY-----------LDPLELSEGKVLSLPLNSSAVVNCSVHGLPTPALR 395
            .: .:.:.|....:|.|.|           |.|.::.||        ......|.|...|    :
  Fly   351 PN-VNGLYLETMWKLNVVYPPLVTLRLGSTLTPDDIKEG--------DDVYFECHVQSNP----Q 402

Human   396 WTK--------------DSTPLGDGPMLSLSSITFDSNGTYVCEASLPTVPVLSRTQNFTLLVQG 446
            |.|              .:..:.....|.|..||....|.|.|.|.......:|  ....|.|:.
  Fly   403 WRKLLWLHNGIHLEHNTSARVIRSNQSLVLQKITKHYAGNYACSAINDEGETVS--NQLPLRVKY 465

Human   447 SPELKTAE----IEPKADGSWREGDEVTLICSARGHPDPK-LSWSQLGGSPAEPIPGRQGWVSSS 506
            :|..|.|:    |....|      :.|.::|..:..|.|: ..|..........:...:..|:.|
  Fly   466 TPMCKHADRVILIGASKD------ETVEVVCEIQADPPPRTFRWKFNNSGETLDVGSERFSVNGS 524

Human   507 LT-LKVTSALSRD--GISCEASNPHGNKRHVFHFGTVSPQTSQAGVAVMAVAVS 557
            .: ||.|....:|  .:||.|||..|.::|        |...|..:|.:..|||
  Fly   525 RSILKYTPVTDQDYGTLSCWASNEVGTQQH--------PCLFQVVLAALPNAVS 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BCAMNP_005572.2 V-set 37..143 CDD:462230 30/111 (27%)
C2-set_2 151..248 CDD:400489 19/102 (19%)
Ig strand C 182..186 CDD:409416 0/3 (0%)
IG_like 280..358 CDD:214653 13/82 (16%)
Ig strand B 287..291 CDD:409353 0/3 (0%)
Ig strand C 300..304 CDD:409353 1/3 (33%)
Interaction with laminin alpha5 309..312 0/2 (0%)
Ig strand E 320..324 CDD:409353 1/3 (33%)
Ig strand F 334..339 CDD:409353 1/4 (25%)
Ig_2 363..437 CDD:464026 17/87 (20%)
Ig_3 464..526 CDD:464046 14/65 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 579..628
side-IINP_001400995.1 V-set 55..163 CDD:462230 30/111 (27%)
Ig_3 190..254 CDD:464046 17/83 (20%)
Ig <292..366 CDD:472250 13/74 (18%)
Ig strand B 292..295 CDD:409418 0/2 (0%)
Ig strand C 305..309 CDD:409418 1/3 (33%)
Ig strand E 329..333 CDD:409418 1/3 (33%)
Ig strand F 343..348 CDD:409418 1/4 (25%)
Ig strand G 359..362 CDD:409418 0/2 (0%)
Ig 382..457 CDD:472250 17/88 (19%)
Ig strand B 391..395 CDD:409405 0/3 (0%)
Ig strand C 405..409 CDD:409405 1/3 (33%)
Ig strand E 428..432 CDD:409405 1/3 (33%)
Ig strand F 442..447 CDD:409405 2/4 (50%)
Ig 486..554 CDD:409353 17/67 (25%)
Ig strand B 486..490 CDD:409353 1/3 (33%)
Ig strand C 500..504 CDD:409353 0/3 (0%)
Ig strand E 526..530 CDD:409353 1/3 (33%)
Ig strand F 540..545 CDD:409353 2/4 (50%)
Blue background indicates that the domain is not in the aligned region.

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