DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nep2 and mmel1

DIOPT Version :9

Sequence 1:NP_001246914.1 Gene:Nep2 / 40588 FlyBaseID:FBgn0027570 Length:774 Species:Drosophila melanogaster
Sequence 2:XP_017213856.1 Gene:mmel1 / 560703 ZFINID:ZDB-GENE-101112-2 Length:765 Species:Danio rerio


Alignment Length:784 Identity:277/784 - (35%)
Similarity:433/784 - (55%) Gaps:55/784 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LEKS--------LLVSLGIMFVVLATGFGLWIGKVLRTSPPSNPQATALHGDSTTINQVPTGTAS 73
            :|||        .:|.:|:..:||.....|....||.||        ||. :...||.     :|
Zfish    11 MEKSTKPRKHRWTVVEIGLSVIVLLMSCALAGLIVLYTS--------ALR-ERFNIND-----SS 61

  Fly    74 KG---KSGDSGDVCLTQECIHTASTVLRKMKPEVEPCDNFYEFACGTYLEEENIPDDKVSISTFS 135
            ||   :|....:||.|.:|:..|:.:|:.|.|.|:||.|||::|||.::|...||:.....|.|:
Zfish    62 KGLKYRSDADSNVCTTPQCVTAAARLLQNMDPSVDPCQNFYQYACGGWIERHVIPETSSLHSVFN 126

  Fly   136 VISDKLQEQLKDIITAERPETEPKHFRLPNLLYKACMNKTLIETLGPEPITRVAERLGGWPLIKG 200
            ::.|:|:..||.::..|..: :.:.|:....||.:|||:.|||....:|:.|:.:.:|.|| :..
Zfish   127 ILRDELEIVLKGVLEMENKD-DREAFKKAKTLYSSCMNEILIEQRDSQPLLRLIDSIGDWP-VAS 189

  Fly   201 DSWNADDSWTWQ-EQVKKFRTAGFSMDYIIDFSIGVDLQNSTKRLIDLDQSSLAL-SREYLVKGF 263
            :.||.....||. |.........::...:::..:..|.::|::.:|.:||.:|.: ||:|.:...
Zfish   190 EVWNGTSEQTWSLEDTLAVLNGRYNKKAVLEMFVWPDDRDSSRYIIHVDQPALGMPSRDYYLSDG 254

  Fly   264 NETLV-TAYYKYMVDIAVLFGANRDLAKTE------LLLSLEFEMALANISWPNEKRRNSSELYN 321
            |...| .||.::||.:|.:...:|:|.:.|      :...||.|..:||.:.|.|:|.:.:.|||
Zfish   255 NYKKVREAYLEFMVSMARIAREDRNLTQDEERVLEDMSQVLELETDIANATSPAEERNDITVLYN 319

  Fly   322 LRTPAQLQAAYPY--VQWVDYMNALLPE-GLNVAEDEMINLSVPSFFEDLGKLLAKTPKRVIANY 383
            ..|..:.|..:..  ..|..|:..::.. .::|..||.|.:....:.|.|.::|:|...|.:.||
Zfish   320 KMTLREAQQTFNLNGFNWTRYIQGIMSSVSISVQSDEPIVIYCSPYLEKLSEVLSKHSHRTLQNY 384

  Fly   384 MFWRIHGFSVGFLSEEFRKRQLQYATALSGRQEQEARWKECVDIATSSMDEVCEDDFDSLGISVG 448
            :.|.:....|..:|..|:..:..|..||.|...:||||::||.....:|:.           :||
Zfish   385 LVWMLIMDRVSSMSRRFKDVRAHYRKALHGTTVEEARWRDCVRYVQGNMEN-----------AVG 438

  Fly   449 SLYVGKHFHKDSKANALEMVNEIRNVFNDILDEVNWMDAKTKKEAKLKLHSMATHIGYPDEML-- 511
            :|||.:.|..:||....|::.:|:..:.:.|:|::|||.::|.:|:.|..:::..|||||.:|  
Zfish   439 ALYVRETFSGNSKRMVGELIKKIQEAYVETLEELSWMDEQSKVKAREKAMAISEQIGYPDHILEE 503

  Fly   512 DNEKLAAYYAKLDIDPDKYFESFLGMNIFGTDYSFNKLRLPVNKTDWVRHARPAIVNAFYSSLEN 576
            :|:||...||.|:...:.|||:.|............|||.||:...|:..|  |:||||||...|
Zfish   504 ENKKLDQEYAHLNFSEENYFENILENLAASAQKGHKKLREPVDPDMWIIGA--AVVNAFYSHNRN 566

  Fly   577 SIQFPAGILQGHFFNAQRPKYMNFGAIGYVIGHEITHGFDDQGRQFDVKGNLRDWWHPDTQKAYL 641
            .|.|||||||..||:.::.:.:|||.||.||||||||||||.||.||..||:.:||...:.:.:.
Zfish   567 QIVFPAGILQPPFFSEKQLQALNFGGIGMVIGHEITHGFDDHGRNFDKDGNMYNWWSNYSAERFE 631

  Fly   642 AKAKCIIEQYGNYT-ERATGLNLNGINTQGENIADNGGVKESYIAYRRWAEKHGPEAKLPGLDYT 705
            .::||::||||.:: :.|.|.|::||.|.||||||||||:::|.||.:|.|:.|.|.:|||||..
Zfish   632 DQSKCMVEQYGRFSWKLAGGQNVSGITTLGENIADNGGVRQAYKAYVKWVEREGEEPRLPGLDMN 696

  Fly   706 PEQMFWVAAGQTWCAKYRKESLKMRITTGVHSPSEFRVLGSLSNMKDFAKDFHCPEGSPMNPVQK 770
            .:|:|::...|.||...|.|.....|.|..|||.|:||||||.|.:.|::.|||..|:||||.:|
Zfish   697 HKQLFFLNFAQVWCGACRPEYAIQTIKTDPHSPLEYRVLGSLQNFEAFSEAFHCARGAPMNPEEK 761

  Fly   771 CEVW 774
            |.||
Zfish   762 CRVW 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep2NP_001246914.1 M13 104..772 CDD:189000 246/682 (36%)
mmel1XP_017213856.1 PepO 88..765 CDD:226118 250/691 (36%)
M13 95..763 CDD:189000 246/682 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG61902
OrthoDB 1 1.010 - - D157132at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100162
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.930

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