DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nep2 and Nep3

DIOPT Version :9

Sequence 1:NP_001246914.1 Gene:Nep2 / 40588 FlyBaseID:FBgn0027570 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_001245775.1 Gene:Nep3 / 33005 FlyBaseID:FBgn0031081 Length:786 Species:Drosophila melanogaster


Alignment Length:792 Identity:278/792 - (35%)
Similarity:430/792 - (54%) Gaps:74/792 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 W-WRRRNKLEKSLLVSLGIMFVVLATGFGLWIGKVLRTSPPSNPQAT--ALH-----GDSTTINQ 66
            | ||.|||.||.||::   .||:..|.|.|.|  ||.|...|: .||  .||     .|..:.|:
  Fly    42 WNWRSRNKTEKWLLIT---TFVMAITIFTLLI--VLFTDGGSS-DATKHVLHVQPHQKDCPSGNE 100

  Fly    67 VPTGTASKGKSGDSGDVCLTQECIHTASTVLRKMKPEVEPCDNFYEFACGTYLEEENIPDDKVSI 131
            :|               ||.:.||..:|.:|:.:...|:|||:||.::|..:::...||:.|.:.
  Fly   101 LP---------------CLNKHCIFASSEILKSIDVTVDPCDDFYGYSCNQWIKNNPIPEGKSTW 150

  Fly   132 STFSVISDKLQEQLKDIITAERPETEPKHF-----RLPNLLYKACMN-KTLIETLGPEPITRVAE 190
            .||..:     ||:..:|.....|...|.|     |...:.|::|:: ...:|.||.:|:..:..
  Fly   151 GTFGKL-----EQMNQLIIRNVLEKPAKSFKSDAERKAKVYYESCLDADEHMEKLGAKPMNDLLL 210

  Fly   191 RLGGWPLIKGDSWNADDSWTWQEQVKKFRTAGFSMDYIIDFSIGVDLQNSTKRLIDLDQSSLAL- 254
            ::|||.:.| ..:|. .:||....:|..... ::.:.:..::||.|.:||::.:|.:||..|.| 
  Fly   211 QIGGWNVTK-SGYNV-ANWTMGHTLKILHNK-YNFNCLFGWAIGEDDKNSSRHVIQIDQGGLTLP 272

  Fly   255 SREYLVKGFNET-----LVTAYYKYMVDIAVLFGANRDLAKTELLLSLEFEMALANISWPNEKRR 314
            :.:|.   .|:|     ::..|.:||..:.||.|||...|:.:::..:.||..||||:.|.|.||
  Fly   273 TADYY---NNKTDNHRKVLNEYIEYMTKVCVLLGANESDARAQMIGVINFEKKLANITIPLEDRR 334

  Fly   315 NSSELYNLRTPAQLQAAYPYVQWVDYM-NALLPEGLNVAEDEMINLSVPSFFEDLGKLLAKTP-- 376
            |...:|:.....||....|::.|.|:. ||:...|..|.:||::.:..|.|.::|..::.|..  
  Fly   335 NEEAMYHPMQLRQLSKLAPFLNWTDHFDNAMQMVGRRVTDDEVVVVYAPDFLKNLSDIILKMEQT 399

  Fly   377 ---KRVIANYMFWRIHGFSVGFLSEEFRKRQLQYATALSGRQEQEARWKECVDIATSSMDEVCED 438
               |..:.||:.|:........||:.||........||.|....|..|:.||           .|
  Fly   400 EEGKITLNNYLVWQAVRTLTSCLSKPFRDAYKGVRKALMGSDGGEEIWRYCV-----------SD 453

  Fly   439 DFDSLGISVGSLYVGKHFHKDSKANALEMVNEIRNVFNDILDEVNWMDAKTKKEAKLKLHSMATH 503
            ..:.:|.:||:::|.:.||.:||..|.:|:.|||..|...|..:.|:|.:|:::|..|.:.::..
  Fly   454 TNNVVGFAVGAIFVRQAFHGESKPAAEQMIAEIREAFKMNLQNLTWVDKQTREKAIEKANQISDM 518

  Fly   504 IGYPDEMLDNEKLAAYYAKLDIDPDKYFESFLGMNIFGTDYSFNKLRLPVNKTDWVRHARPAIVN 568
            ||:||.:||..:|...||:|:|.|:.|||:.:.:.|:....:..:|..|||||:|  ...|..||
  Fly   519 IGFPDYILDPVELDKKYAELNITPNAYFENNIQVAIYNLKSNLKRLDQPVNKTNW--GMTPQTVN 581

  Fly   569 AFYSSLENSIQFPAGILQGHFFNAQRPKYMNFGAIGYVIGHEITHGFDDQGRQFDVKGNLRDWWH 633
            |:|:..:|.|.|||||||..||:...||.:||||:|.|:|||:||.||||||::|..||:..||.
  Fly   582 AYYTPTKNQIVFPAGILQTPFFDINNPKSLNFGAMGVVMGHELTHAFDDQGREYDKFGNINRWWD 646

  Fly   634 PDTQKAYLAKAKCIIEQYGNYTERATGLNLNGINTQGENIADNGGVKESYIAYRRW-AEKHGPEA 697
            ..:.:.:..|::||..||..|  :..|..|||..|.|||||||||:|.:|.||:|. :::.....
  Fly   647 SKSIERFNEKSECIARQYSGY--KMNGRTLNGKQTLGENIADNGGLKAAYHAYQRTKSDRDVDIL 709

  Fly   698 KLPGLDYTPEQMFWVAAGQTWCAKYRKESLKMRITTGVHSPSEFRVLGSLSNMKDFAKDFHCPEG 762
            |||||:.|..|:|:|:..|.||:....|:..:::....||||:|||:|:|||||:||:.|.|..|
  Fly   710 KLPGLNLTHSQLFFVSFAQVWCSSTTDETNLLQMEKDPHSPSQFRVIGTLSNMKEFAEVFQCKPG 774

  Fly   763 SPMNPVQKCEVW 774
            ..|||.:|||||
  Fly   775 KRMNPTEKCEVW 786

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep2NP_001246914.1 M13 104..772 CDD:189000 241/686 (35%)
Nep3NP_001245775.1 M13 123..784 CDD:189000 241/686 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3745
OMA 1 1.010 - - QHG61902
OrthoDB 1 1.010 - - D17125at7147
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100162
Panther 1 1.100 - - P PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.780

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