DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nep2 and goe

DIOPT Version :9

Sequence 1:NP_001246914.1 Gene:Nep2 / 40588 FlyBaseID:FBgn0027570 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_001285350.1 Gene:goe / 32660 FlyBaseID:FBgn0027528 Length:879 Species:Drosophila melanogaster


Alignment Length:741 Identity:157/741 - (21%)
Similarity:271/741 - (36%) Gaps:178/741 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 VCLTQECIHTASTVLRKMKPEVEPCDNFYEFACGTYLEEENIPDDKVSISTFSVISDKLQEQLKD 147
            :||.:||:.::..:|........||...||:|||      |...|..:...|.:   |..|...:
  Fly   162 LCLDKECVESSRQLLLWANTSKSPCHETYEWACG------NFASDYANHEYFVI---KRGEWNYE 217

  Fly   148 IITAERPETEPKHF--RLPN-----------LLYKAC-----MNKTLIETLGPEPITRVAERLGG 194
            .....:...|...|  .|||           .||::|     ::|:..:.|    :.|....:.|
  Fly   218 TYNEYQELNELNRFIAMLPNSQEGSVESTVSSLYRSCRETDVLDKSQSDLL----LKRAINAVYG 278

  Fly   195 WPLIKGDSWNADDSWTWQE-----QVKK-----FRTA---GFS--MDYIIDFSIGVDLQNSTKRL 244
            |...: || |...||.::.     |.|.     :|..   |||  .||:                
  Fly   279 WQAFR-DS-NRLQSWEYKRVLVVLQAKHGIFPYYRVTVENGFSNPHDYV---------------- 325

  Fly   245 IDLDQSSLALSREYLV-KGFNETLVTAYYKYMVDIAVLFG-ANR-------DLAKTELLLSLEFE 300
            |.||:..|.|..:|.. ...:|.:|..|...:.|.|:..| .:|       |:...|..:....|
  Fly   326 ITLDEGELGLPDKYFYGNDADEEVVRGYKLLLRDFAINMGIVSREADLFADDIFHYERRIVNHIE 390

  Fly   301 MALANISWPNEKRRNSSELYNLRTPAQLQAAYPYVQWVDYMNALLPEGLNVAEDEMINLSVPSFF 365
            .|.|:.:.|..|         |...|.|:...|.:..::.:.|:.|: ..:.||..:.:..|...
  Fly   391 DAKADANRPINK---------LMRLADLKIKAPSLPILESLQAIFPK-TKITEDTEVLVRDPEVM 445

  Fly   366 EDLGKLLAKTPKRVIANYMFWRIHGFSVGFLSEEFRKRQLQYATALSGRQEQEARWKECVDIATS 430
            ..|..||:.:.|:.|.|::.|.:....:..||:|:|.....:..||.||.....||..|..:.. 
  Fly   446 HALSVLLSTSDKKPINNFIVWSLARKMLPHLSKEYRTLAETFDHALYGRTASYPRWLICSKVVR- 509

  Fly   431 SMDEVCEDDFDSLGISVGSLY---VGKHFH-KDSKANALE-----------MVNEIRNVFNDILD 480
                      |.|..:|.:|.   ..:.|. ..||:..|.           |...:||...|.|:
  Fly   510 ----------DWLPFAVDALQQQPPRQQFETMTSKSRGLNKTQGNEELLKLMFFSLRNQLKDSLE 564

  Fly   481 EVNWMDAKTKKEAKLKLHSMATHIGYPDEMLDNEK-LAAYYAKLDIDPDKYFESFLGMNIFGTD- 543
            :..|::...::..:.||:.|....|.|||:|.... ||.||.:|.::           |:|..: 
  Fly   565 QAKWLEPAARQFIQKKLNEMRLQFGIPDEVLQQPTYLAQYYNELILN-----------NVFFVEH 618

  Fly   544 ----YSFNKLRL-----PVNKTD------WVRHARPAIVNAFYSSLENSIQFPAGILQGHFFNAQ 593
                ::|.:.::     |:...|      :.|....||.   ||:..|.:.....::..::::.:
  Fly   619 LEWIWTFRRSQMEKKLGPLAILDVIVSEMYTRDNPQAIA---YSNKLNMLLVSKVLISSNYYDYR 680

  Fly   594 RPKYMNFGAIGYVIGHEITHGFDDQGRQFDVKG-NLRD------WWHPDTQKAYLAKAKCIIEQY 651
            .|..:||..||..|...:...|.....||:.:. ::.|      :..||.......:...::.:.
  Fly   681 YPVAVNFARIGTDILEALIDNFSTFLLQFNTQSTDISDAAPEIRYAQPDVNCLAAGQPPRLVHEL 745

  Fly   652 GNYTE-----------------RATGLNLNGINT----QGENIADNGGVKESYIAYRRWAEKHGP 695
            ...:.                 ||....:|.|:.    ||..| |.....|:....||       
  Fly   746 NELSSNALKSFHVTLSAARTAARALSNFVNAIDAGSAIQGSGI-DQANTYEALGLTRR------- 802

  Fly   696 EAKLPGL-DYTPEQMFWVAAGQTWCA 720
             .::||| .:...::|.::..|..|:
  Fly   803 -LRIPGLRSFNENELFTLSYMQQHCS 827

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep2NP_001246914.1 M13 104..772 CDD:189000 152/720 (21%)
goeNP_001285350.1 GluZincin 184..>694 CDD:301352 128/575 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.