DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nep2 and Nepl3

DIOPT Version :10

Sequence 1:NP_001246914.1 Gene:Nep2 / 40588 FlyBaseID:FBgn0027570 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_608904.1 Gene:Nepl3 / 326172 FlyBaseID:FBgn0031678 Length:629 Species:Drosophila melanogaster


Alignment Length:613 Identity:130/613 - (21%)
Similarity:219/613 - (35%) Gaps:148/613 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 VCLTQECIHTASTVLRKMKPEVEPCDNFYEFACGTYLEEENIPDDKVSISTFSVISDKLQEQLKD 147
            ||.....:.....:|..|..:||||.|||           |.....:....|:.:||:.|.....
  Fly    21 VCSANPNLEIMKRMLDDMDEKVEPCHNFY-----------NSSQKNLKWHAFATVSDQFQLLFDG 74

  Fly   148 IITAERPETEPKHFRLPNL--LYKACMNKTLIETLGPEPITRVAERLGGWPLI--KGDSWNADDS 208
            |    ..|...||.....|  |||.|........|....:.:..|.| .||.:  :|..| ..:.
  Fly    75 I----ENEVFEKHSFEEKLQRLYKICSTMERPSLLRYFELVKPGEDL-NWPFLTPRGGKW-PKEK 133

  Fly   209 WTWQEQVKKFRTAGFSMDYIIDFSIGVDLQNSTKRLIDLDQSSLALSREY--LVKGFNETL--VT 269
            :.|.|.:.:.|..||: |.:...||..| .||     |..|..:...::|  |.: |.|:|  :.
  Fly   134 FQWMEALARLRRYGFN-DIMFGMSIRQD-PNS-----DSGQPIVVFEKKYDSLFR-FIESLQNIG 190

  Fly   270 AYYKYMVDIAVLFGANRDLAKTELLLSLEFEMALANISWPNEKRRNSSELYNLRTPAQLQAAYPY 334
            ...|...:||.|..|.:::.|::    ::||....:.:..........|:|.:.....|:..:  
  Fly   191 LPPKLAKEIAPLDNAIQEMYKSD----MKFEHYARDAAPVKRISLGQLEIYGVSLTKYLEIVF-- 249

  Fly   335 VQWVDYMNALLPEGLNVAEDEMINLSVPSFFEDLGKLLAKTPKRVIANYMFWRI----------H 389
                         |...:.|.::::....:...|..|:...|.:|:|||:..|.          |
  Fly   250 -------------GRPFSPDFVVHVENLYYLRGLQNLMTAVPSQVVANYLTARFSFYIMFTFMKH 301

  Fly   390 G------------FSVGFLSEE---FRKRQLQYATALSG-----RQEQEARWKECVDIATSSMDE 434
            |            |:...|.||   .||:...|......     ||:...|.:..|.....:...
  Fly   302 GDSCVTTMRQSMEFASNLLFEERILGRKKLRSYQNQAGKIFDAIRQQLNIRLERNVLKLPPAEIS 366

  Fly   435 VCEDDFDSLGISVGSLYVGKHFHK---DSKANALEMVN--EIRNVFNDILD-----EVNWMDAKT 489
            :.:...:.|.:|:|:| .||..|:   ......||..:  |:......:|:     |::.:|...
  Fly   367 LLQKKLNGLSLSIGNL-PGKAGHRRFVTRYYKELEFADDEELATAHLKVLEHRTRAELSLLDQPN 430

  Fly   490 KKEAKLKLHSMATHIGYP---------DEMLDNEKLAAY--YAKLDIDPDKYFESF----LGMNI 539
            .|:.:..|||      ||         .|...|....||  .|....|||.: :.|    ||:. 
  Fly   431 FKDRRYMLHS------YPISNFFFETAYEENGNTIYVAYDFLADASFDPDSH-DIFKVTPLGIR- 487

  Fly   540 FGTDY--SFNKLRLPVNKTDW--------VRHARPAIVNAFYSSLENSIQFPAGILQGHFFNAQR 594
            ||.:.  ||:......:|.:.        :..|....|:|:  :.:|.:             :||
  Fly   488 FGLEMLKSFDLFNCKHHKVNMLQLFDDNQITTAGDECVSAW--TQDNLL-------------SQR 537

  Fly   595 PKYMNFGAIGYVIGHEITHGFDDQGRQF 622
            .:|:       |:.|.:...:..:|.:|
  Fly   538 DQYL-------VVLHLVHEAYFAEGSKF 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep2NP_001246914.1 M13 104..772 CDD:341056 126/592 (21%)
Nepl3NP_608904.1 GluZincin 42..>434 CDD:472708 94/436 (22%)

Return to query results.
Submit another query.