DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep2 and frma

DIOPT Version :9

Sequence 1:NP_001246914.1 Gene:Nep2 / 40588 FlyBaseID:FBgn0027570 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster


Alignment Length:738 Identity:152/738 - (20%)
Similarity:274/738 - (37%) Gaps:208/738 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 KMKPEVEPCDNFYEFACGTYLEEENIPDDKVSISTFSVISDKL----QEQLKDIITAERPETEPK 159
            |..|:.:||.|||:.|||.:....       :..::....|:|    ||:|.|::..||.:.|| 
  Fly    20 KSHPQADPCQNFYKVACGNWSASH-------ATDSYESFMDRLDYNYQEKLADLLDNEREDDEP- 76

  Fly   160 HF--RLPNLLYKACMNKTLIETLGPEPITRVAERLGGWPLIKGDSWNADDSWTWQEQVKKFRTAG 222
            ||  :|.| .|.||.     :.|..:.:.|:.|.|    ::..:..|        |::....||.
  Fly    77 HFLQQLRN-FYTACR-----KPLSQDQVLRILEHL----IVMENIQN--------EELSVGLTAA 123

  Fly   223 FSMDYIID------FSIGVDLQNSTKRLIDLDQSSLALSREYLVK----------GFNETLVTAY 271
            |.:..:||      :.|...|.:..|.......:...|:||...|          .|.|     |
  Fly   124 FRLQVLIDLNDSNTYDIWKQLMSHRKHWDPNTTNREPLTREMFDKLWASLPKIPFPFKE-----Y 183

  Fly   272 YKYMVDIAVLFGANRDLAKTELLLSLEFEMALANISWPNEKRRNSSELYNLRTPAQLQAAYPY-- 334
            |.            |:|::.|..:          :|:.:|.....|.....|.|       |:  
  Fly   184 YW------------RELSELEEKI----------MSYGSEDDGFDSGDLVTRIP-------PFWM 219

  Fly   335 VQWVDYMNALLPEGLNVAEDEMINLSVPSFFEDLGKLLAKTPKRVIANYMFWRIHGFSVGFLSEE 399
            :.|        |.| |:..:   |||..:.:.|:      .....|..|::.|:...:.|..:|.
  Fly   220 MPW--------PNG-NITYE---NLSQMAHWLDI------KANEFILTYIYMRLKLVAEGVSTES 266

  Fly   400 F---------RKRQLQYATALSGRQEQEARWKECVDIATSSMDEVCEDDFDSLGISVGSLYVGKH 455
            :         :.||:....|....::...|.||         :.|.:|.|..|         .:.
  Fly   267 WHIDRDQCAEQSRQILSHPAAWLVEKNHPRLKE---------EPVLQDIFAEL---------KQR 313

  Fly   456 FHKDSKANALEMVNEIRNVFNDILDEVNWMDAKTKKEAKLKLHSMATHIGYPDEMLDNEKLAAYY 520
            |.:...||   ..|..|:..:.:|.::        |..:|:| |:.........|:  .::..:|
  Fly   314 FGQKLLAN---RNNFTRSTQHFLLGKL--------KRMRLRL-SILPRNSSAQSMV--RRIERHY 364

  Fly   521 AKLDIDPDKYFESF-LGMN--------------IFGTDYSFNKLRLP--VNKTD----WVRHARP 564
            ..:.::...||.:. :|:|              :||      :..:|  ::|:|    .|| ...
  Fly   365 RDVHMNASDYFGNLHIGLNHSRSHKKYAQLWAIVFG------RQLIPSRISKSDLYPTQVR-GYG 422

  Fly   565 AIVNAFYSSLENSIQFPAGILQGHFFNAQRPKYMNFGAIGYVIGHEITHGFDDQGRQFDVKG--- 626
            ...:|||...:|.:..|..:|:..|:...:|..:.:.|:|:::|||::||||.:|..|...|   
  Fly   423 TYASAFYIVKQNMLIVPLSLLEPPFYTHGQPSILTYSALGFILGHELSHGFDSEGMTFSSHGVGS 487

  Fly   627 -----NLRDWWHPDTQKAYLAKAKCIIEQYGNYTERATGLNLNGINTQGENIADNGGVKESYIAY 686
                 .|      |....:..:..|:..::|              ..:.|..||..|::.:|.||
  Fly   488 SAVDREL------DRNPRFQQELGCLRRRFG--------------RKRYEKFADASGLELAYSAY 532

  Fly   687 RRWAEKHGPEAKLPGLDYTPEQMFWVAAGQTWCAKYRKESLKMRITTGVHSPSEFRVLGSLSNMK 751
            ...|:......:......|.:|.|:....|.:|:.  ||.|:..    .|.....||..::::.:
  Fly   533 FDTAQTDHKRNRSAEELVTQKQQFFHNFAQFFCSD--KELLQAH----DHGSDRKRVNDAVAHFE 591

  Fly   752 DFAKDFHCPEGSPMNPVQKCEVW 774
            .|.:.|.|   .|....::|.::
  Fly   592 PFREAFSC---GPSPRRRQCRLY 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep2NP_001246914.1 M13 104..772 CDD:189000 149/729 (20%)
frmaNP_572226.2 GluZincin 25..601 CDD:301352 148/721 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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