DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep2 and nep-24

DIOPT Version :9

Sequence 1:NP_001246914.1 Gene:Nep2 / 40588 FlyBaseID:FBgn0027570 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_503005.3 Gene:nep-24 / 190993 WormBaseID:WBGene00013786 Length:567 Species:Caenorhabditis elegans


Alignment Length:624 Identity:137/624 - (21%)
Similarity:228/624 - (36%) Gaps:145/624 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 DVCLTQECIHTASTVLRKMKPEVEPCDNFYEFACGTYLEEENIPDDKVSISTFSVISDKLQEQLK 146
            :||.|..||..|..:.....|.|:|||||::||||.  |.|:..:|..:..| ..|::.::..||
 Worm    36 NVCNTPACITLAHMLHNYHDPSVDPCDNFHQFACGR--EHEHETEDIYTKKT-KTINNIMKRFLK 97

  Fly   147 DIITAERPETEPKHFRLPNLLYKAC----MNKTLIETLGPEPITRVAERLGGWPLIKGDSWNADD 207
            ...|: |.::|    .....|||||    .|.|.......:.|.:..:.:|.||::       ||
 Worm    98 KNETS-RSKSE----NAMRTLYKACKTLEKNSTASRNKALQDIFQDIQSIGAWPVV-------DD 150

  Fly   208 SWTWQEQVKKFRTAGFSMDYIIDFSIGVDLQNSTKRLIDLDQSSLAL---SREYLVKGFNETLVT 269
            .|    ...||                 ||.:....|:.|.:.:..|   :|...|:.|      
 Worm   151 KW----DESKF-----------------DLNDFLVNLVRLGRKNFGLFQMARYVNVRNF------ 188

  Fly   270 AYYKYMVDIAVLFGANRDLAKTELLLSLEFEMALANISWPNEKR--RNSSELYNLRTPAQ----- 327
                 .:.....:..|.||.||   :|   |:..||....|.|:  .:.:|..||.....     
 Worm   189 -----AIGPEAAWRHNVDLGKT---IS---EILKANSVQTNNKKLLDDLAEYVNLEKALSQHKFN 242

  Fly   328 -LQAAYPYVQWVDYMNA-----------------LLPEGLNVAEDEMINLSVPSFF---EDLGKL 371
             :|..|.:.:..|::::                 |.||...:.  .:.|.|:  ||   .:|..:
 Worm   243 TVQPGYIFSERSDFVSSVNFSRLVLEMMSPDKRTLFPEVYQIM--YLTNTSL--FFGKNNNLETI 303

  Fly   372 LAKTPKRVIANYMFWRIHGFSVGFLSEEFRKRQLQYATALSGRQEQEARWKECVDIATSSMDEVC 436
            :..|.||.:|||:.::....|:                               .|:...|....|
 Worm   304 IRNTSKRALANYLIFKFIDTSI-------------------------------ADLTYGSPSAFC 337

  Fly   437 EDD-FDSLGISVGSLYVGKHFHKDSKANALEMVNEIRNVFNDILDEVNWMDAKTKKEAKLKLHSM 500
            |.. .:.|..:....:......|:::....::....:.....|:...:||..|:||.|..::.||
 Worm   338 EQKVINFLPRAALRAFYRNFISKENRKKITKLTEATQVQLLKIIGATDWMSIKSKKIAMDRVSSM 402

  Fly   501 ATHIGYPDEMLDNEKLAAYYAKLDI-DPDKYFESFLGMNIFGTDYSFNKLRLPVNKTDWVRHARP 564
            ...|||||......||...:..|:: ..|.|:.....:|.|          :...:.|:.....|
 Worm   403 NMVIGYPDYFDPPGKLDGLFEHLNLSSSDTYYTVVRKINRF----------MREQEMDYYTGEVP 457

  Fly   565 -------AIVNAFYSSLENSIQFPAGILQGHFFNAQRPKYMNFGAIGYVIGHEITHGFDDQGRQF 622
                   .:.||.|::.:|::...|......||::..|.|.|.......:.||:.|.|..  ...
 Worm   458 YYPLFPGLMTNAMYNANDNNLMIFAPFFDDPFFDSSFPDYANIAFTSNTLAHEMGHTFSP--HLM 520

  Fly   623 DV-KGNLRDWWHPDTQKAYLAKAKCIIEQYGNYTERATG 660
            |: .|....|..|...:.|..:.||:.:||..|.:...|
 Worm   521 DIMTGTTEVWLTPKETEEYEKRVKCLEDQYTEYDDPEYG 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep2NP_001246914.1 M13 104..772 CDD:189000 130/602 (22%)
nep-24NP_503005.3 GluZincin 58..561 CDD:301352 130/602 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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