DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep2 and nep-18

DIOPT Version :10

Sequence 1:NP_001246914.1 Gene:Nep2 / 40588 FlyBaseID:FBgn0027570 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_494297.1 Gene:nep-18 / 186911 WormBaseID:WBGene00019343 Length:701 Species:Caenorhabditis elegans


Alignment Length:782 Identity:166/782 - (21%)
Similarity:324/782 - (41%) Gaps:168/782 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 PTGTASKGKSGDSGDVCLTQECIHTASTVLRKMKPEVEPCDNFYEFACGTYLEEENIPDD----- 127
            |:| :|...:| |.:.|.::||:...:.:.......|:||::|:|..||.|  .|::.||     
 Worm    13 PSG-SSNAPNG-SPETCWSKECVGVLAMIKNYQNASVDPCEDFFEHTCGRY--SEHVMDDNSWGY 73

  Fly   128 ----KVSISTFSV------ISDKLQEQLKDIITAERPETEPKHFRLPNLLYKACMNKTLIETLGP 182
                ::....|::      .:.|..|||:                   :..|:|:::..::....
 Worm    74 VQYKQLLYQVFAIARKTNKFNSKPNEQLR-------------------IFTKSCLDRKEMDEDTF 119

  Fly   183 EPITRVAERLGGWPLIKGDSWNADDSWTWQEQVKKF------RTAGFSMD--------------- 226
            :.:....|..||:|:| ..:|| ::.:...:.:.|:      |....|::               
 Worm   120 QDLRNDIEERGGFPMI-DPNWN-EEKFDLSDMLAKYLSINRNRMGFLSVEPYAAIEGNKSVNRLY 182

  Fly   227 ------YIIDFSIGVDLQNST-----KRLIDLDQSSLALSREYLVKGFNETLVTAYYKYMVDIAV 280
                  ::.::::|:.:...:     :||:.|:...|           |||:....:..:|.:..
 Worm   183 VSPGPHWVYNWAMGISIYKDSVAFMLRRLLKLENREL-----------NETIYDKEFAELVQLEA 236

  Fly   281 LFGANRDLAKTELLLSLEFEMALANISWPNEKRRNSSELYNLRTPAQLQAAYPYVQWVDYMNALL 345
            .|....|...    |:|:.:    |:|    |.||.::|..:         .|.:.|:..:.||.
 Worm   237 NFSTLADYRN----LALDND----NMS----KSRNLTDLVKM---------IPEIDWIKILKALA 280

  Fly   346 PEGLNVAEDEMI--NLSVPS----FF---EDLGKLLAKTPKRVIANYMFWR-IHGFSVGFLSEEF 400
            ..|.:..::|.:  .::|..    ||   .:|.::..:|||..:|||:..| :...::.|..:: 
 Worm   281 RHGTSEEDEEKLLERVTVHGAGEYFFGENRELARIATETPKSALANYLVVRQLIDVALYFYDKD- 344

  Fly   401 RKRQLQYATALSGRQEQEARWKECVDIATSSMDEVCE-DDFDSLGISVGSLYVGKHFHKDSKANA 464
                          |.::.::...||..:....:|.. ....|:.:.:.|    ..|..::....
 Worm   345 --------------QPRQNKFYNHVDQQSFCATQVASFFPMPSMNVFIES----SQFKIENLKVI 391

  Fly   465 LEMVNEIRNVFNDILDEVNWMDAKTKKEAKLKLHSMATHIGYPDEMLDNEKLAAYYAKLD-IDPD 528
            .||..:|:..:..|..|..:::.:.::....||:::....|..........|...|..|: :|.|
 Worm   392 EEMFVKIKAEYEQIFTENEYLELEIREFLIRKLNAIDGKFGLDQYTEGKPLLEKMYETLNFLDTD 456

  Fly   529 KYFESFLGM-----------NIFGTDYSFNKLRLPVNKTDWVRHA--RPAIVNAFYSSLENSIQF 580
            ..::.::.|           .:..|...      |||...:..||  :| ..|.||.:|. .:.:
 Worm   457 SPWQVYMKMWRHWSEQLVEHIVHDTPLD------PVNLKMFGTHAAYQP-YPNHFYINLP-YLTY 513

  Fly   581 PAGILQGHFFNAQRPKYMNFGAIGYVIGHEITHGFDDQGRQFDVKGNLRDWWHPDTQKA---YLA 642
            |       :.:|..|...|:|.:||||||||.|.||...|:.|..|..:.:|..:|..:   |..
 Worm   514 P-------WMDADFPANTNYGYLGYVIGHEIGHAFDHFHRKLDESGRQQQYWFTETNSSNTEYEL 571

  Fly   643 KAKCIIEQYGNYTERATGLNLNGINTQGENIADNGGVKESYIAYRRWAEKHGPEAKLPGLDYTPE 707
            :.||:.:||..|.|......:||.:.:.|...|:.|::.::..:.:  .|.....:||||:.:.|
 Worm   572 REKCLRDQYSAYKEPGYDFFMNGTHCRYEIAGDHMGIRTAFRVFEK--VKKEDRFRLPGLEMSEE 634

  Fly   708 QMFWVAAGQTWCAKYRKESLKMRITTGVHSPSEFRVLGSLSNMKDFAKDFHCPEGSPMNPVQKCE 772
            |:|:.......|..|....|...:....|..:.:||.|.:.|:.:||:.|:||:.|||||..||:
 Worm   635 QLFFYNYAFRQCDVYNPNKLPRNMLARQHPTNRYRVNGVIQNIPEFAEAFNCPKNSPMNPEMKCK 699

  Fly   773 VW 774
            ::
 Worm   700 LY 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep2NP_001246914.1 M13 104..772 CDD:341056 157/742 (21%)
nep-18NP_494297.1 M13 47..699 CDD:341056 157/742 (21%)

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