DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nep2 and F41C6.4

DIOPT Version :9

Sequence 1:NP_001246914.1 Gene:Nep2 / 40588 FlyBaseID:FBgn0027570 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_001129930.1 Gene:F41C6.4 / 185599 WormBaseID:WBGene00018278 Length:393 Species:Caenorhabditis elegans


Alignment Length:607 Identity:108/607 - (17%)
Similarity:167/607 - (27%) Gaps:313/607 - (51%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 EPCDNFYEFAC--GTYLEEENIPDDKVSISTFSVI--------------SDKLQEQLKDIITAER 153
            :|||:||..||  |.|        |.:.:..::.|              :.|::|.|.:|...|.
 Worm    34 DPCDDFYRHACPVGDY--------DFLVLMKYAPIFKELETSQEESAWENLKIEEALNNIKPGEI 90

  Fly   154 PETEPKHFRLPNLLYKACMNKT------LIET---LGPEPITRV-AE----RLGGWPLIKGDS-- 202
            ......:|.  .:....|.|..      |:.|   |..|..|:. ||    |||      |||  
 Worm    91 ENEISAYFE--RVFLDMCQNNDPAMTTFLLRTQQMLSHEMSTKCRAENCLLRLG------GDSNC 147

  Fly   203 -----------WNADDSWTWQEQVKKFR--TAGF-----SMDYIID--FSIGVDLQNSTKRLIDL 247
                       ....||..:||.|.|.|  .||:     :::.::|  |.:|||..||       
 Worm   148 TRAANDFKSRVAKKTDSSHYQEYVLKLRENIAGWKNKTRAVNILLDGNFKVGVDNINS------- 205

  Fly   248 DQSSLALSREYLVKGFNETLVTAYYKYMVDIAVLFGANRDLAKTELLLSLEFEMALANISWPNEK 312
                                   :...|||:              ||..::....:|        
 Worm   206 -----------------------FLMNMVDV--------------LLQWIQVYKYIA-------- 225

  Fly   313 RRNSSELYNLRTPAQLQAAYPYVQWVDYMNALLPEGLNVAEDEMINLSVPSFFEDLGKLLAKTPK 377
             :|..||....||           ||:              |:.||.::.:...||         
 Worm   226 -KNPFELILQETP-----------WVN--------------DQKINRALEAVARDL--------- 255

  Fly   378 RVIANYMFWRIHGFSVGFLSEEFRKRQLQYATALSGRQEQEARWKECVDIATSSMDEVCEDDFDS 442
                             |:.:|:            |.|.:|            ::|.:.:.:.|.
 Worm   256 -----------------FVIDEY------------GIQLRE------------NIDALMKTEQDF 279

  Fly   443 LGISVGSLYVGKHFHKDSKANALEMVNEIRNVFNDILDEVNWMDAKTKKEAKLKLHSMATHIGYP 507
            |..|..  :.|||                 ::|..|.......:.:|         :...|.||.
 Worm   280 LKCSAD--FSGKH-----------------DLFCSIYSYHFMFNGRT---------TTVLHFGYD 316

  Fly   508 DEMLDNEKLAAYYAKLDIDPDKYFESFLGMNIFGTDYSFNKLRLPVNKTDWVRHARPAIVNAFYS 572
                                                        ..|:..::....|.|..|..|
 Worm   317 --------------------------------------------ATNRHPYIYFGMPFIARAANS 337

  Fly   573 SLENSIQFPAGILQGHFFNAQRPKYMNFGAIGYVIGHEITHGFDDQGRQFDVKGNLRDWWHPDTQ 637
            .:.                      .|.|..|||:|||::|...:                 :..
 Worm   338 EMA----------------------ANLGLAGYVVGHELSHSLIE-----------------NPS 363

  Fly   638 KAYL-----AKA-KCIIEQYGN 653
            |:||     |:| .||..||.|
 Worm   364 KSYLLPYSSAEAINCIQTQYNN 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep2NP_001246914.1 M13 104..772 CDD:189000 108/607 (18%)
F41C6.4NP_001129930.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.