DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep2 and nep-8

DIOPT Version :10

Sequence 1:NP_001246914.1 Gene:Nep2 / 40588 FlyBaseID:FBgn0027570 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_001309548.1 Gene:nep-8 / 184631 WormBaseID:WBGene00017553 Length:686 Species:Caenorhabditis elegans


Alignment Length:735 Identity:162/735 - (22%)
Similarity:287/735 - (39%) Gaps:168/735 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 SKGKSGDSGDVCLTQECIHTASTVLRKMKPEVEPCDNFYEFACGTYLEEENIPDDKVSISTFSVI 137
            |.|...||.::|.:.|||..:..:|....|.|:||.:|::.:||.:.|:      .||.|.....
 Worm    45 SIGNDVDSKNLCDSPECITLSHELLNYQDPSVDPCVDFFQHSCGRFHEQ------SVSESRLQKK 103

  Fly   138 SDKLQEQLKDIITAERPETEPKHFRLPNLLYKAC--MNKTLIETLGPEPITRVA--------ERL 192
            ...|::|:::.:...:..|. |...|..|::..|  ..||..:..   .|:|.|        :::
 Worm   104 KHILRKQIREFLHKIQNSTS-KSENLMKLVFDKCEASKKTSNDNY---KISRDAIHDVFNDIKKI 164

  Fly   193 GGWPLIKGDSWNADDSWTWQEQVKKFRTAGFSMDYIIDFSIGVDLQNSTKRLIDLDQSSLALSR- 256
            |.|||:       |.:|    ...||                 ||......|:.|..::|.|.: 
 Worm   165 GAWPLL-------DKNW----DGSKF-----------------DLNEMLSNLVKLGATNLGLFQL 201

  Fly   257 --EYLVKGFNETLVTAYYKYMVDIAVLFGANRDLAKTELLLSLEFEMALANISWPNEKRRNSS-- 317
              ..|.:|          |: |.||...|:   :.....::|:..|:..||...|:.:..:..  
 Worm   202 DFRILTEG----------KF-VRIAPTLGS---IVHNSTMISMISEILEANGVQPDSEEISKEFE 252

  Fly   318 -------ELYNLRTPAQLQAAYPYVQWVDYMNALLPEGLN-------VAEDEMINLSVPSFF--- 365
                   :|...::..:|..:.|.|:.::: ::|:.|.::       ..:..::....|.||   
 Worm   253 EYSSLQMKLAKYQSSGKLSISLPGVRSINF-SSLITEMIHPSRVSKIFGKIRVVTSEHPLFFKSN 316

  Fly   366 --EDLGKLLAKTPKRVIANYMFWRIHGFSVGFLSEEFRKRQLQYATALSGRQEQEARWKECVDIA 428
              |.|..::..|..:.:||::.              |...|..|......|:..           
 Worm   317 ETESLDTIIESTSNKTLANFLI--------------FNYIQSSYNIMKGARRGN----------- 356

  Fly   429 TSSMDEVCEDD----FDSLGISV--------GSLYVGKHFHKDSKANALEMVNEIRNVFNDILDE 481
                   ||||    |....:.|        |:....|...::.|.|.|||:.:..|:       
 Worm   357 -------CEDDVRREFPRASLRVFMRNFVDKGNRDGVKKLTEELKKNTLEMIQDTENL------- 407

  Fly   482 VNWMDAKTKKEAKL-KLHSMATHIGYPDEM-----LDNEKLAAYYAKLDID-PDKYFESFLGMNI 539
                 |...||:.| |:.::...|||||..     ||.|     :...|:| .|.|:..|..:|.
 Worm   408 -----APPVKESMLKKVEAIKVTIGYPDHFDPPGTLDKE-----FENFDLDSTDSYYRIFQKLNR 462

  Fly   540 FGTDYSFNKL--RLPVNKTDWVRHARPAIVNAFYSSLENSIQFPAGILQGHFFNAQRPKYMNFGA 602
            ..::.....:  ..|::....|..     |||.|...:|::...|..|...||:...|.|:|...
 Worm   463 LRSEQQMEFIAGETPISPIKEVLK-----VNANYKRSKNALTVFAPFLDDPFFDITYPDYVNLFF 522

  Fly   603 IGYVIGHEITHGFDDQGRQFDVKGNLRDWWHPDTQKAYLAKAKCIIEQYGNYTERATGLNLNGIN 667
            .|::|.|||.|..|..|..:|..|...|....:....|..:.:|:::||.||.:...|..:||.:
 Worm   523 SGFLIAHEIGHSVDANGLGYDENGKPMDGIRLEHVTEYGKQGQCLVDQYDNYDDPVYGKKMNGTH 587

  Fly   668 TQGENIADNGGVKESYIAYRRWAEKHGPEAKLPGL-DYTPEQMFWVAAGQTWCAKYRKESLKMRI 731
            :..|.|||..|.:.::.||::.  .......|.|| |...:|:::......:|.:  ::::.:..
 Worm   588 SINEIIADWVGHEVTWRAYKKM--DTSKMLSLIGLKDINMDQLYFRVQSLLFCRE--RDTISLEE 648

  Fly   732 T-TGVHSPSEFRVLGSLSNM 750
            | ..|:....|||.|:.:.:
 Worm   649 TLKDVYPTDNFRVNGAYARV 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep2NP_001246914.1 M13 104..772 CDD:341056 152/704 (22%)
nep-8NP_001309548.1 M13 76..664 CDD:341056 151/698 (22%)

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