DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep2 and nep-4

DIOPT Version :10

Sequence 1:NP_001246914.1 Gene:Nep2 / 40588 FlyBaseID:FBgn0027570 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_509156.2 Gene:nep-4 / 183746 WormBaseID:WBGene00016896 Length:437 Species:Caenorhabditis elegans


Alignment Length:595 Identity:107/595 - (17%)
Similarity:199/595 - (33%) Gaps:229/595 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 DYIIDFSIGVDLQNSTKRLIDLDQSSLALSREYLVKGFNETLVTAYYKYMVDIAVLFGANRDLAK 290
            ::..||     ::|:.::::|                :.......:|::...:    |:..|:.|
 Worm    17 EHPFDF-----IENALEKIVD----------------WKSDPCDDFYRHACPV----GSIEDIIK 56

  Fly   291 TELLLSLEFEMALANISWPNEKRRNSSELYNLRTPAQLQAAYPYVQWVDYMNALLPEGLNVAEDE 355
                :|::......|.||..:.:||..::||                                  
 Worm    57 ----VSMQPLKDALNHSWKQKGQRNEGKVYN---------------------------------- 83

  Fly   356 MINLSVPSFFEDLGKLLAKTPKRVIANYMFWRIHGFSVGFLSEEFRKRQLQYATALSGRQEQEAR 420
             ||..                :..|..:.|.::.     |:..:::.|.:.|.|...|..:    
 Worm    84 -INFR----------------RSHICCHFFCKLL-----FIYYDYQYRFINYVTFYDGMLQ---- 122

  Fly   421 WKECVDIATSSMDEVCEDDFDSLGISVGSLYVGKHFHKDSKANALEMVNEIRNVFNDILDEVN-W 484
                                        .||    :|.:  ||..:.:|||..:..|:::..| |
 Worm   123 ----------------------------PLY----YHVE--ANVTDGINEIHQMMEDMVELGNIW 153

  Fly   485 MDAKTKKEAKLKLHSMATHIGYP----DEMLDNEKLAAYYAKLDIDPDKYFESFLGMNIFGTDYS 545
            :: ||                 |    :.:.:..|......|:.:...||           |::.
 Worm   154 LE-KT-----------------PWVINNNLTEEMKNITNAIKMPVSLTKY-----------TNFI 189

  Fly   546 FNKLRLPVNKTDWVRHARPAIVNAFYSSLENSIQF----PAGIL---QGHFF------NAQRPKY 597
            :|.|. |: :||::.     .|:.| ..::|:..|    .|.|.   :|.:|      ||:...|
 Worm   190 YNLLS-PI-ETDFLN-----CVSEF-EGIQNNTLFCLFYSAKIFVRTRGSYFIDDNGYNAEGTIY 246

  Fly   598 MNF-------------GAIGYV---IGHEITHGFDDQGRQFDVKGNLRDWWHPDTQKAYLAKAK- 645
            ..|             ..:||.   :||||.|.|.:..            .:||....:...|: 
 Worm   247 FGFPNYYHTTYGNWRASKLGYTGTRVGHEIGHTFIEHS------------INPDGLPYFSKPAED 299

  Fly   646 CIIEQY----GNYTERATGLNLNGINTQGENIADNG----GVKESY-IAYRRWAEKHGPEAKLPG 701
            |:..||    ..|.|   |...:..||......|||    |::.:| |..|..:::...:|  .|
 Worm   300 CVQNQYLKTCNEYYE---GEVPDACNTSDYTFDDNGADVFGLQLAYAILERDLSDQLREQA--DG 359

  Fly   702 LDYTPEQMFWVAAGQTWCAKYRKESLKMRITTGVHSPSEFRVLGSLSNMKDFAKDFHCPEGSPM- 765
            |..|.||:.:.:....:|     ...|...|.|.||....|: .:::.|..|.:.|:|...|.| 
 Worm   360 LKITNEQLLFYSFAYRFC-----RGSKSNTTDGSHSHHNVRI-NAVAQMPGFQQAFNCASDSRMM 418

  Fly   766 -NPVQKCEVW 774
             :..::|.::
 Worm   419 KSATKQCVIY 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep2NP_001246914.1 M13 104..772 CDD:341056 106/591 (18%)
nep-4NP_509156.2 GluZincin 250..425 CDD:472708 45/197 (23%)

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