DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep2 and nep-17

DIOPT Version :10

Sequence 1:NP_001246914.1 Gene:Nep2 / 40588 FlyBaseID:FBgn0027570 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_001254395.1 Gene:nep-17 / 174996 WormBaseID:WBGene00010070 Length:1589 Species:Caenorhabditis elegans


Alignment Length:815 Identity:206/815 - (25%)
Similarity:358/815 - (43%) Gaps:141/815 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LWIGKVLRTSPPSNPQATALHGDSTTINQVP----TGTASKGKSGDSGDVCLTQECIHTASTVLR 98
            :|:..:..|        ..|....|.||.||    |.|.....:.....|....:.::||     
 Worm   832 VWVSDIDTT--------FGLPNVKTDINVVPEAPITSTNVDKMNAYQMAVDYYAKSVNTA----- 883

  Fly    99 KMKPEVEPCDNFYEFACGTYLEEENIPDDKVSISTFSVISDKL---QEQLKDIITAERPETEPKH 160
                 ::|||:||.:|||.:.:         |:|.::..:..|   .::|:|........:.|. 
 Worm   884 -----IDPCDDFYSYACGNFNQ---------SVSFYTARAQNLVYMAQKLEDPTYQTTINSSPA- 933

  Fly   161 FRLPNLLYKACM--------------NKTLIETLGPEPITRVAERLGGWPLIKGDSWNADDSWTW 211
            .:....||.||:              :|..|:|...:..|.:.:   .:.|:.|.:         
 Worm   934 LKKEKQLYNACLTATASSQSEDQILISKNYIQTKVDDLKTLIGQ---DFTLVNGGA--------- 986

  Fly   212 QEQVKKFRTAGFSMDYIIDFSIGVD-----------LQNSTKRLIDLDQSSLALSREYLVKGFNE 265
             .::...:..|.::.| :.|..|:|           :.||....:.:||::..||:.|......:
 Worm   987 -PKLPSAKQIGDALGY-LSFEQGIDTLISPLVDTYWIDNSKGYQMFIDQNTAYLSKTYYQPAAWK 1049

  Fly   266 TLVTAYYKYMVDIAVLFGANRDL---AKTELLLS--LEFEMALA-NISWPNEKRRNSSELYNLRT 324
            .....|.|..:|:...:...:::   |....|||  |::|..:| ..|..:..||.....:||..
 Worm  1050 IEKPKYLKMALDVVTRYAREQNITLPAGASDLLSNVLDYEQNIAVKYSTDDNTRRQFQRSWNLTK 1114

  Fly   325 PAQLQAAYPYVQWVDYM----NALLPEGLNVAEDEMINLSVPSFFEDLGKLLAKTPKRVIANYMF 385
            .:.|...|.::.|:.|:    ||:..: :..|..::..:.|..........|.::|: ::.|.:|
 Worm  1115 TSDLVTKYNFMDWMTYLSHAPNAVKAK-ITDANYQVSVMEVDRLTHFSADYLQQSPE-LLVNLLF 1177

  Fly   386 WRIHGFSVGFLSEEFRKRQLQYATALSGRQEQ-----------------------EARWKECVDI 427
            .|:...:..::.        .||:|..|..::                       ||....|..:
 Worm  1178 VRLLLGNAQYIP--------SYASAFRGMTDESIFLGLSRRKTIPNHIPPPNFDLEANGPACASV 1234

  Fly   428 ATSSMDEVCEDDFDSLGISVGSLYVGKHFHKDSKANALEMVNEIRNVFNDILDEVNWMDAKTKKE 492
            |.:.|      .|.:..:.|..:|.......:.:.:|..::..:.:.|..::|:::||...||::
 Worm  1235 ANNLM------QFANGRVFVDYMYPTAQDVTNIRKSAGGIIKNVISSFQGMIDQLDWMAPDTKQK 1293

  Fly   493 AKLKLHSMATHIGYPDEMLDNEKLAAYYAKLDI-DPDKYFESF---LGMNIFGTDYSFNKLR-LP 552
            |..|...:..:|.:||.:.::..|..||:.|.| |.|.:::.:   :..|||   ..:|:|. ..
 Worm  1294 AYAKTVQIQQNIAFPDWIKNDTLLGNYYSTLVIADSDNFYDIYDKLIKFNIF---VQYNQLNAAQ 1355

  Fly   553 VNKTDWVRHARPAIVNAFYSSLENSIQFPAGILQGHFFNAQRPKYMNFGAIGYVIGHEITHGFDD 617
            .::||::  .:|..|||:|....|||.||||||...:||...|..:|:|.:|.|.|||:||||||
 Worm  1356 TDRTDFL--GQPGTVNAWYQPELNSITFPAGILVPPYFNPNWPPSINYGGMGLVAGHELTHGFDD 1418

  Fly   618 QGRQFDVKGNLRDWWHPDTQKAYLAKAKCIIEQYGNYTE-RATGLNLN---GINTQGENIADNGG 678
            ||.|:...|||..|...::...:...::|:|.:|..:.. .||..:.|   |..|||||||||||
 Worm  1419 QGVQWGPTGNLARWMDDNSMAGFKNMSQCVINEYSGFCPLNATNYSPNCVKGPQTQGENIADNGG 1483

  Fly   679 VKESYIAYRRWAEKHGPEAKLPGL---DYTPEQMFWVAAGQTWCAKYR-KESLKMRITTGVHSPS 739
            |..::.||:......||:.:||..   .:|.:|:|:::..|.||...| .::|..:|....||||
 Worm  1484 VHAAFNAYKTHQSLDGPDPRLPDRLFGQFTHDQLFFMSFAQVWCEVRRTDDALYTQIMVDPHSPS 1548

  Fly   740 EFRVLGSLSNMKDFAKDFHCPEGSPMNPVQKCEVW 774
            .:||.|::.|...|...|:||.||...|.|.||||
 Worm  1549 MYRVYGTIQNFPAFQTAFNCPLGSKSAPEQHCEVW 1583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep2NP_001246914.1 M13 104..772 CDD:341056 189/741 (26%)
nep-17NP_001254395.1 M13 112..831 CDD:341056
M13 884..1581 CDD:341056 189/741 (26%)
Blue background indicates that the domain is not in the aligned region.

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