DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nep2 and nep-3

DIOPT Version :9

Sequence 1:NP_001246914.1 Gene:Nep2 / 40588 FlyBaseID:FBgn0027570 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_494679.2 Gene:nep-3 / 173730 WormBaseID:WBGene00016778 Length:634 Species:Caenorhabditis elegans


Alignment Length:729 Identity:173/729 - (23%)
Similarity:291/729 - (39%) Gaps:192/729 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 VCLTQECIHTASTVLRKMKPEVEPCDNFYEFACGTYLEEENIPDDKVSISTFSVISDKLQEQL-K 146
            :|||.|||.....:|....|.|:||:|||:.|||.| .|.|:.|...:.....::...:::.| |
 Worm    61 MCLTPECITLVHQLLNFQDPSVDPCENFYQAACGKY-NEHNVIDGSRTAQKQQIVKRLIRDFLHK 124

  Fly   147 DIITAERPETEPKHFRLPNLLYKACMNKTLIETLGPEPITRV----AERLGGWPLIKGDSWNADD 207
            :..:..:.|...|      |||:.|.....|:.||.:.:.:.    .:::|.||::       |:
 Worm   125 NQSSTSKSENSMK------LLYEKCKEAKTIKVLGNQNLLQEIFMNIQKIGSWPVL-------DE 176

  Fly   208 SWTWQEQVKKFRTAGFSMDYIIDFSIGVDLQNSTKRLIDLDQSSLALSREYLVKGFNETLVTAYY 272
            :|    ..|||                 :|......||.|..|:.         ||.|.::::  
 Worm   177 NW----DGKKF-----------------NLNEMLLSLIRLGVSNF---------GFFEIIISS-- 209

  Fly   273 KYMVDIAVLFGANRDLAKTELLLSLEFEMALANISWPNEKRRNSSELYNLRTPAQLQAAYPYVQW 337
                |..|.....|:....|.|..:..::.|.|...||.....:    :||....||..      
 Worm   210 ----DAFVEIKPARNFPTRENLSDIISKVFLGNGFQPNITAIEN----DLREYENLQRE------ 260

  Fly   338 VDYMNALLPEGLNVAEDEMINLSVPSFFEDLGKLLAKTPKRVIANYMFWRIHGFSVGFLSEEFRK 402
                                       .:.|.:|:..||.|.:.||:.:..           .:.
 Worm   261 ---------------------------LKSLERLIQTTPNRSLVNYLIFNY-----------LKS 287

  Fly   403 RQLQYATALSGRQEQEARWKECVDIATSSMDEVCEDDFDSLGISVGSLYVGKHFHKDSKANALEM 467
            ..|:|.     |..:|    :|..:.           .|.|..:...::|.....|:::.....|
 Worm   288 VMLEYK-----RLPEE----QCEGVV-----------IDFLPRASTRVFVQNFLDKENRKYVAGM 332

  Fly   468 VNEIRNVFNDILDEVNWMDAKTKKEAKLKLHSMATHIGYPDEMLDNEKLAAYYAKLDIDPDKYFE 532
            :.:::..|.|::.|..|::.::||.|..|:.::.:.|||||                     :||
 Worm   333 IEDVKMGFIDMIQESTWLNEESKKVAVQKVKNIKSMIGYPD---------------------FFE 376

  Fly   533 -------SFLGMNIFGTD-----------------YSFNKLRLPVNKTDWVRHARPAIVNAFYSS 573
                   ||..:||..||                 ..|....:|::....:.||     ||||.:
 Worm   377 PPGTLDRSFKDLNIEQTDSYHTIVRKIQKFTNEQCMEFVASEIPLDPRQPILHA-----NAFYQN 436

  Fly   574 LENSIQFPAGILQGHFFNAQRPKYMNFGAIGYVIGHEITHGFDDQGRQFDVKGNLRDWWHPDTQK 638
             .|.:...|.:|....|:...|:|:|...||.|:.|||.|.||..|..:|..|..|.|..|:..:
 Worm   437 -TNFLAILAPVLDDPIFDTTFPRYVNLAVIGNVLAHEIGHAFDHTGINYDDAGQQRIWLTPEDSE 500

  Fly   639 AYLAKAKCIIEQYGNYTERATGLNLNGINTQGENIADNGGVKESYIAYRRWAEKHGPEAKLPGL- 702
            .|..:.:|::.|:..|.:...|.||||..|..|..||..||:.::..:::....:  |:::.|. 
 Worm   501 EYGKRLRCLLRQHDEYDDPDFGRNLNGSKTLHEISADRFGVEAAWRTFKKLDLSN--ESEIVGFQ 563

  Fly   703 DYTPEQMFWVAAGQTWCAKYRKESLKMRITTGV-------HSPSEFRVLGSLSNMKDFAKDFHCP 760
            ::..:|:::..|...||        :.|.||.:       |..:.|||.|..:||..||:.|:||
 Worm   564 NFNIDQLYFRTAALIWC--------RQRDTTDLQYALQREHPTNNFRVNGIYANMPQFAETFNCP 620

  Fly   761 EGSPMNPVQKCEVW 774
            .||||||.:||:::
 Worm   621 LGSPMNPKKKCDLF 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep2NP_001246914.1 M13 104..772 CDD:189000 164/704 (23%)
nep-3NP_494679.2 M13 82..631 CDD:189000 163/703 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.