DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep2 and nep-13

DIOPT Version :10

Sequence 1:NP_001246914.1 Gene:Nep2 / 40588 FlyBaseID:FBgn0027570 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_001342017.1 Gene:nep-13 / 173672 WormBaseID:WBGene00018196 Length:732 Species:Caenorhabditis elegans


Alignment Length:822 Identity:192/822 - (23%)
Similarity:333/822 - (40%) Gaps:200/822 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LVSLGIMFVVLATGFG----LWIGKVLRTSPPSNPQATALHGDSTTINQVPTGTASKGKSGDSGD 82
            |:|:.|..|::|...|    .|       ...|.|||..                 |.....:.|
 Worm    42 LISIIICLVIIAICMGAVIVFW-------RMDSAPQAIC-----------------KTDHNKTRD 82

  Fly    83 VCLTQECIHTASTVLRKMKPEVEPCDNFYEFACGTYLEEENIPDDKVSISTFSVISDKLQEQ--L 145
            ||.|.|||..:||:|......::||::|||::||.|  :|:..:|.:..:....|..||..|  |
 Worm    83 VCKTAECITLSSTLLNWQNTNIDPCEDFYEYSCGRY--QEHTLNDGIRANEKDTIVMKLIRQFVL 145

  Fly   146 KDIITAERPETEPKHFRLPNLLYKACMNKTLIETLGPEPITRVAER--------LGGWPLIKGDS 202
            |:..|....|....      |||:.|..:..:|....|  |.|.:|        :|.||:     
 Worm   146 KNQSTTSNSENALM------LLYEKCSLRYRMENRHQE--TEVIQREVFENIRKIGSWPI----- 197

  Fly   203 WNADDSWTWQEQVKKFRTAGFSMDYIIDFSIGVDL---------------QNSTKRLIDLDQSSL 252
              ||.:|         .::.|:::.::.....:.:               .|:|.:.:.:..:.|
 Worm   198 --ADKNW---------NSSHFNLNNMLSNMASIHMLPFGLFETRVIELYPMNTTAKQLVIRPTKL 251

  Fly   253 ALS--REYLVKGFNETL----VTAYYKYM-VDIAVLFGANRDLAKTELLLSLEFEMALANISWPN 310
            ..|  :|.||:...:.|    :|:..|.: .|:|..|..::::....:              .|.
 Worm   252 KFSIPQEELVRAIRDLLSVNGITSIMKKVKEDVAESFALDKEIGNIHI--------------DPQ 302

  Fly   311 EKRRNSSELYNLRTPAQLQAAYPYVQWVDYMNALLPEGLNVAEDEMINLSVPSF---FE------ 366
            .|....||         ||.|.|.:.:    ..::...||.......:|....|   ||      
 Worm   303 PKPATLSE---------LQKAVPDIDF----ERIIKSYLNPKTGNWSSLRTKIFSARFELFFGKN 354

  Fly   367 -DLGKLLAKTPKRVIANYMFWRIHGFSVGFL--------SEEFRKRQLQYATALSGRQEQEARWK 422
             :|..::|:|..|::|||:|.:...::..|.        .::|                      
 Worm   355 NNLSSIIARTKPRILANYLFLKYIEYAYFFFFDNTKVFSDDDF---------------------- 397

  Fly   423 ECVDIATSSMDEVCEDDFDSLGISVGSLYVGKHFHKDSKANALEMVNEIRNVFNDILDEVNWMDA 487
             |.::.|:|:...      ||.:     :|..||.|::.|.|.|:|..::..:.:|::...|:..
 Worm   398 -CTEVVTTSLPRA------SLRV-----FVRNHFKKENMAVASEIVEVVKTAYVEIINNSTWLHN 450

  Fly   488 KTKKEAKLKLHSMATHIGYPDEMLDNEKLAAYYAKLDID-PDKYFESFLGMNIFGTDYSFNKLRL 551
            .|::.|..|:..|...|||.:|......|...:..|.:. .|.:|.....:|.|    ...:|..
 Worm   451 STRESAIEKVVKMKKVIGYTEEYERTGALDEMFETLQLSRSDSFFVLMTKVNRF----KIEQLMD 511

  Fly   552 PVNKTDWVRHARPAIV-NAFYSSLENSIQFPAGILQGHFFNAQRPKYMNFGAIGYVIGHEITHGF 615
            .|:....:....|.:: ||||...:|.:......|....|:.:.|:|:....:|.|:.|||.|.|
 Worm   512 FVSSDSLLNPIEPLVMANAFYFPTKNLLNVLVPFLDKPLFDFKYPRYVAMAGVGRVLAHEIGHAF 576

  Fly   616 DDQGRQFDVKGNLRDWWHPDTQKAYLAKAKCIIEQYGNYTERATGLNLNGINTQGENIADNGGVK 680
            |..|||.|..|..||||..:..:.|..:::|..||:.|:.:.:.....||.....|.|||..|::
 Worm   577 DINGRQTDEIGRTRDWWTREDTEEYDRRSECFAEQFTNFKDPSFKGKQNGTEVLAEIIADALGME 641

  Fly   681 ESYIAYRRWAEKHGPEAKLPGLDYTPEQ------------MFWVAAGQTWCAKYR-KESLKMRIT 732
            .|:||:::             ::.|.||            :::..|...:||..| :|....:::
 Worm   642 ASWIAFKK-------------INLTEEQGLIQFEDHDFGKLYFQVAALDFCAPSRIEERYSDQLS 693

  Fly   733 TGVHSPSEFRVLGSLSNMKDFAKDFHCPEGSPMNPVQKCEVW 774
               |..::||:.|:.||.:.||..:.||.||.|||||:|:::
 Worm   694 ---HPTNKFRINGAFSNSRAFADTYKCPVGSKMNPVQRCDMF 732

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep2NP_001246914.1 M13 104..772 CDD:341056 169/732 (23%)
nep-13NP_001342017.1 M13 104..729 CDD:341056 169/731 (23%)

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