DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF3f1 and MEE34

DIOPT Version :9

Sequence 1:NP_649489.1 Gene:eIF3f1 / 40587 FlyBaseID:FBgn0037270 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_187736.1 Gene:MEE34 / 820298 AraportID:AT3G11270 Length:310 Species:Arabidopsis thaliana


Alignment Length:285 Identity:83/285 - (29%)
Similarity:147/285 - (51%) Gaps:31/285 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VRVHPVVLFQVVDAFERRNAD-SHRVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVE---AELSY 68
            |.|||:||..:||.:.|...| |.||:|.||||..:|.|:|||.:.||.:|.|....   .:.:|
plant    17 VIVHPLVLLSIVDHYNRVAKDTSKRVVGVLLGSSSRGTVDVTNSYAVPFEEDDKDTSIWFLDHNY 81

  Fly    69 ALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGL--RA 131
            ...|:.:.:::|:.|.:|||::||..:..:...:|..:.....|||.:.:|  :|...:|:  :|
plant    82 HESMFHMFKRINAKEHIVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIID--VQPKELGIPTKA 144

  Fly   132 YVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISE 194
            |..::......  ||..:|..:|.|:.::|.|..|::.|.:.|      :..|:..:     .:|
plant   145 YYAVEEVKENATQKSQQVFVHVPTEIAAHEVEEIGVEHLLRDV------KDTTISTL-----ATE 198

  Fly   195 ASTKLQSL--LDLILK----YVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRN 253
            .:.||.:|  ||..|:    |:|.||..|:..::.:...|.|:.:.:|::...:..:.|.....:
plant   199 VTAKLTALKGLDARLREIRTYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAFAVKTND 263

  Fly   254 LLLVITLSQLIKTQLQL----NEKL 274
            ::|||.||.||::.:.|    |.||
plant   264 MMLVIYLSSLIRSVIALHSLINNKL 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3f1NP_649489.1 MPN_eIF3f 8..274 CDD:163695 81/283 (29%)
MEE34NP_187736.1 PLN03246 10..310 CDD:215645 83/285 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1310
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.