DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3f1 and BRCC36B

DIOPT Version :10

Sequence 1:NP_649489.1 Gene:eIF3f1 / 40587 FlyBaseID:FBgn0037270 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_001078118.1 Gene:BRCC36B / 819866 AraportID:AT3G06820 Length:405 Species:Arabidopsis thaliana


Alignment Length:190 Identity:41/190 - (21%)
Similarity:80/190 - (42%) Gaps:29/190 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 QNDFIILSLVKTRNIGHIRDVRRLVVALSRAR----LGLYVLGRSKVFMDCLELTPAMRIFAKYP 114
            ||:.::..::| :|.|.:|.....|.|.:...    |..|..|..:.|.|..:.:...::.|:..
plant   980 QNESLVFQILK-KNAGKVRLFTCGVGATANRHMLRCLAQYGAGFFEFFEDKSKSSWKKKMEAQLE 1043

  Fly   115 RKLVILPFEAHPTIRKWNERSKDGEPMEIQDTLHMTHFVHEFYM---SNLPAMRDAYEQAMNEYM 176
            |  :..|.....:: ||.:.| |.:|..:|...|:....:..::   ...|....|..||:    
plant  1044 R--MDSPACTSASV-KWMQFS-DNDPEPVQAPAHIPALFNRSFLLVYGFAPRCTQAKLQAL---- 1100

  Fly   177 ESQRLLNPPIDETQMD--VETEHEKKHREAMERK--KKQEMDDKKEADIHFEDMDHEMQE 232
                     ||:.::|  |.|...:|.|..|..|  .:..:.|.::..:|.::.:|||::
plant  1101 ---------IDDNELDTMVSTTELQKTRGTMLHKLTARAVIKDYEDGILHEKEHEHEMKK 1151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3f1NP_649489.1 MPN_eIF3f 8..274 CDD:163695 41/190 (22%)
BRCC36BNP_001078118.1 MPN_BRCC36 3..363 CDD:163699
Blue background indicates that the domain is not in the aligned region.

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