DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF3f1 and EIF2

DIOPT Version :9

Sequence 1:NP_649489.1 Gene:eIF3f1 / 40587 FlyBaseID:FBgn0037270 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_181528.1 Gene:EIF2 / 818587 AraportID:AT2G39990 Length:293 Species:Arabidopsis thaliana


Alignment Length:270 Identity:105/270 - (38%)
Similarity:158/270 - (58%) Gaps:10/270 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LTVRVHPVVLFQVVDAFERRNADSHRVIGTLLGSV-DKGVVEVTNCFCVPHKEHDDQVEAELSYA 69
            ||.|:||:|:|.|.|.|.||...:.|||||||||: ..|.|::.|.:.|||.|..|||..::.|.
plant    26 LTARIHPLVIFNVCDCFVRRPDSAERVIGTLLGSILPDGTVDIRNSYAVPHNESSDQVAVDIDYH 90

  Fly    70 LDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVC 134
            .:|...:.||||.|::|||::||..|...||:||::||||..||:||||||....|...::|:|.
plant    91 HNMLASHLKVNSKETIVGWYSTGAGVNGGSSLIHDFYAREVPNPIHLTVDTGFTNGEGTIKAFVS 155

  Fly   135 IQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKL 199
            ..|.:...:....|..|||:|...:.|..|..:|:.|   |....|.      ||..:.....:|
plant   156 SNLSLGDRQLVAHFQEIPVDLRMVDAERVGFDVLKAT---SVDKLPN------DLEGMELTMERL 211

  Fly   200 QSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRNLLLVITLSQLI 264
            .:|::.:.||||.|:..::.|||.:||.:.|.:.|:|.:..:.|..:.|.::::.||::.||.:.
plant   212 LTLINDVYKYVDSVVGGQIAPDNNIGRFIADAVASLPKLPPQVFDNLVNDSLQDQLLLLYLSSIT 276

  Fly   265 KTQLQLNEKL 274
            :|||.|.|||
plant   277 RTQLSLAEKL 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3f1NP_649489.1 MPN_eIF3f 8..274 CDD:163695 101/266 (38%)
EIF2NP_181528.1 MPN_eIF3f 29..286 CDD:163695 101/265 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 109 1.000 Domainoid score I2137
eggNOG 1 0.900 - - E1_COG1310
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2783
Inparanoid 1 1.050 192 1.000 Inparanoid score I1369
OMA 1 1.010 - - QHG54712
OrthoDB 1 1.010 - - D1038775at2759
OrthoFinder 1 1.000 - - FOG0004972
OrthoInspector 1 1.000 - - otm3208
orthoMCL 1 0.900 - - OOG6_103242
Panther 1 1.100 - - LDO PTHR10540
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3506
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

Return to query results.
Submit another query.