DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3f1 and Psmd14

DIOPT Version :9

Sequence 1:NP_649489.1 Gene:eIF3f1 / 40587 FlyBaseID:FBgn0037270 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_067501.2 Gene:Psmd14 / 59029 MGIID:1913284 Length:310 Species:Mus musculus


Alignment Length:80 Identity:24/80 - (30%)
Similarity:35/80 - (43%) Gaps:11/80 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VIGTLLGS-VDKGVVEVTNCFCVPHKEHDDQVEA-ELSYALDMYDLNRKVNSNESVVGW------ 88
            |:|.:||. ||...|.|.:.|.:|.......||| :..:...|.|:.::....|.||||      
Mouse    53 VMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPG 117

  Fly    89 ---WATGNDVTNHSS 100
               |.:|.|:....|
Mouse   118 FGCWLSGVDINTQQS 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3f1NP_649489.1 MPN_eIF3f 8..274 CDD:163695 24/80 (30%)
Psmd14NP_067501.2 MPN_RPN11_CSN5 21..286 CDD:163700 24/80 (30%)
JAMM motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01182 113..126 2/12 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1310
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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