DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3f1 and STAMBPL1

DIOPT Version :9

Sequence 1:NP_649489.1 Gene:eIF3f1 / 40587 FlyBaseID:FBgn0037270 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_065850.1 Gene:STAMBPL1 / 57559 HGNCID:24105 Length:436 Species:Homo sapiens


Alignment Length:72 Identity:15/72 - (20%)
Similarity:31/72 - (43%) Gaps:13/72 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 QISEAST----KLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANV 251
            |::|::|    :...:|...|.:.:..|.|.:.|..:.|....|:         |...::||...
Human   281 QLAESNTVRGIETCGILCGKLTHNEFTITHVIVPKQSAGPDYCDM---------ENVEELFNVQD 336

  Fly   252 RNLLLVI 258
            ::.||.:
Human   337 QHDLLTL 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3f1NP_649489.1 MPN_eIF3f 8..274 CDD:163695 15/72 (21%)
STAMBPL1NP_065850.1 USP8_dimer 28..129 CDD:286108
GBP_C <120..198 CDD:303769
MPN_AMSH_like 266..436 CDD:163697 15/72 (21%)
JAMM motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01182 347..360
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1310
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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