DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3f1 and eif3f

DIOPT Version :9

Sequence 1:NP_649489.1 Gene:eIF3f1 / 40587 FlyBaseID:FBgn0037270 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_001186938.1 Gene:eif3f / 557270 ZFINID:ZDB-GENE-100215-2 Length:273 Species:Danio rerio


Alignment Length:270 Identity:134/270 - (49%)
Similarity:192/270 - (71%) Gaps:4/270 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VRVHPVVLFQVVDAFERRNADSHRVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEAELSYALDM 72
            |::|||||..:||::||||..:.||||||||:.||..|:|||||.|||.|.:|:|..::.:|.:|
Zfish     8 VKIHPVVLASIVDSYERRNEGASRVIGTLLGTADKHSVDVTNCFSVPHNESEDEVAVDMEFAKNM 72

  Fly    73 YDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQL 137
            |:|::||:.:|.:|||:|||.|:|.||.:|||||:||..||:||||||:||..:|.:||||..|:
Zfish    73 YELHKKVSPSEVIVGWYATGFDITEHSVLIHEYYSREAPNPIHLTVDTALQSNKMNIRAYVSSQM 137

  Fly   138 GVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQSL 202
            ||||...|.||||:.|:...|:.|..|:.|||:| ..||.   :|.....||||::.|:.::|.:
Zfish   138 GVPGKTVGVMFTPLSVKYIYYDTERIGVDLLQRT-RASPG---RTNGLTTDLAQVAGAAGRVQEM 198

  Fly   203 LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRNLLLVITLSQLIKTQ 267
            |..:|.|::||::.||..||:|||.|:||::.||.:..|.|..|.|:|:.:||:|..|:.|.:.|
Zfish   199 LATVLSYIEDVLSGKVMADNSVGRFLMDLVNKVPKIPAEDFENMLNSNINDLLMVTYLANLTQAQ 263

  Fly   268 LQLNEKLTFL 277
            :.|||||..|
Zfish   264 IALNEKLVVL 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3f1NP_649489.1 MPN_eIF3f 8..274 CDD:163695 131/265 (49%)
eif3fNP_001186938.1 MPN_eIF3f 8..270 CDD:163695 131/265 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580867
Domainoid 1 1.000 134 1.000 Domainoid score I4989
eggNOG 1 0.900 - - E1_COG1310
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2783
Inparanoid 1 1.050 275 1.000 Inparanoid score I2935
OMA 1 1.010 - - QHG54712
OrthoDB 1 1.010 - - D1038775at2759
OrthoFinder 1 1.000 - - FOG0004972
OrthoInspector 1 1.000 - - oto40846
orthoMCL 1 0.900 - - OOG6_103242
Panther 1 1.100 - - LDO PTHR10540
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3506
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.810

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