DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3f1 and eif3f

DIOPT Version :9

Sequence 1:NP_649489.1 Gene:eIF3f1 / 40587 FlyBaseID:FBgn0037270 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_001016190.1 Gene:eif3f / 548944 XenbaseID:XB-GENE-5898648 Length:285 Species:Xenopus tropicalis


Alignment Length:267 Identity:134/267 - (50%)
Similarity:188/267 - (70%) Gaps:4/267 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VRVHPVVLFQVVDAFERRNADSHRVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEAELSYALDM 72
            |:||||||..:||::||||..:.||||||||:.||..|||||||.|||.|.:|:|..::.:|.:|
 Frog    20 VKVHPVVLASIVDSYERRNEGAGRVIGTLLGTTDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNM 84

  Fly    73 YDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQL 137
            |:|::||.|.|.:|||:|||||:|.||.:|||||:||..||:|:||||||||.||.::||:...:
 Frog    85 YELHKKVTSTEQIVGWYATGNDITEHSVLIHEYYSREATNPIHMTVDTSLQGNRMNIKAYISSPM 149

  Fly   138 GVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQSL 202
            ||||...|.||||:.|:...|:.|..|:.|:.||.    |:..:::....||.|:..|:.:||..
 Frog   150 GVPGKTMGVMFTPLTVQYVYYDTERIGVDLITKTC----ANPNRSIGLTTDLQQVGVAANRLQDS 210

  Fly   203 LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRNLLLVITLSQLIKTQ 267
            |..:|:|.:||::.|||.||.|||.|:||:..||.:..|.|..|.|:|:.:||:|..|:.|.::|
 Frog   211 LSTVLQYAEDVLSGKVTADNTVGRFLMDLVTQVPKIDPEDFEAMLNSNINDLLMVTYLANLTQSQ 275

  Fly   268 LQLNEKL 274
            :.|||||
 Frog   276 IALNEKL 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3f1NP_649489.1 MPN_eIF3f 8..274 CDD:163695 132/265 (50%)
eif3fNP_001016190.1 MPN_eIF3f 20..282 CDD:163695 132/265 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 141 1.000 Domainoid score I4704
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H2783
Inparanoid 1 1.050 260 1.000 Inparanoid score I3039
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1038775at2759
OrthoFinder 1 1.000 - - FOG0004972
OrthoInspector 1 1.000 - - oto102653
Panther 1 1.100 - - LDO PTHR10540
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R381
SonicParanoid 1 1.000 - - X3506
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1010.190

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