DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3f1 and Psmd14

DIOPT Version :10

Sequence 1:NP_649489.1 Gene:eIF3f1 / 40587 FlyBaseID:FBgn0037270 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_001020860.1 Gene:Psmd14 / 311078 RGDID:1594532 Length:310 Species:Rattus norvegicus


Alignment Length:80 Identity:24/80 - (30%)
Similarity:35/80 - (43%) Gaps:11/80 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VIGTLLGS-VDKGVVEVTNCFCVPHKEHDDQVEA-ELSYALDMYDLNRKVNSNESVVGW------ 88
            |:|.:||. ||...|.|.:.|.:|.......||| :..:...|.|:.::....|.||||      
  Rat    53 VMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPG 117

  Fly    89 ---WATGNDVTNHSS 100
               |.:|.|:....|
  Rat   118 FGCWLSGVDINTQQS 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3f1NP_649489.1 MPN_eIF3f 8..274 CDD:163695 24/80 (30%)
Psmd14NP_001020860.1 MPN_RPN11_CSN5 21..286 CDD:163700 24/80 (30%)

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