DRSC/TRiP Functional Genomics Resources

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Protein Alignment smash and FHL5

DIOPT Version :10

Sequence 1:NP_001246912.1 Gene:smash / 40583 FlyBaseID:FBgn0263346 Length:1541 Species:Drosophila melanogaster
Sequence 2:NP_065228.4 Gene:FHL5 / 9457 HGNCID:17371 Length:284 Species:Homo sapiens


Alignment Length:77 Identity:23/77 - (29%)
Similarity:28/77 - (36%) Gaps:21/77 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1463 KCSHCGDELGKLCYYVGCRGAAMIIESLLLF----YHINCFKCCVCHVQL-GDGLNGTDVRVRNH 1522
            ||..|...:.      |..||..|     .|    :|..||.|..|.|.| |.|.     ..:|.
Human   221 KCVACSKPIS------GLTGAKFI-----CFQDSQWHSECFNCGKCSVSLVGKGF-----LTQNK 269

  Fly  1523 KLHCQNCYSSDD 1534
            ::.||.|.|..|
Human   270 EIFCQKCGSGMD 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smashNP_001246912.1 DUF4757 <47..153 CDD:464950
PAT1 <1159..>1335 CDD:401645
LIM <1494..1530 CDD:395333 12/36 (33%)
FHL5NP_065228.4 LIM <5..34 CDD:413332
LIM1_FHL 37..95 CDD:188729
LIM2_FHL5 102..155 CDD:188812
LIM3_FHL 163..214 CDD:188732
LIM4_FHL 222..277 CDD:188733 19/70 (27%)
Blue background indicates that the domain is not in the aligned region.

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