DRSC/TRiP Functional Genomics Resources

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Protein Alignment smash and FBLIM1

DIOPT Version :9

Sequence 1:NP_001246912.1 Gene:smash / 40583 FlyBaseID:FBgn0263346 Length:1541 Species:Drosophila melanogaster
Sequence 2:NP_001019386.1 Gene:FBLIM1 / 54751 HGNCID:24686 Length:374 Species:Homo sapiens


Alignment Length:346 Identity:66/346 - (19%)
Similarity:104/346 - (30%) Gaps:144/346 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   363 PKVDISKRKEIFEQAKAEVSNG---GAPAAPKLVFRDGL--------TNGNSATTAPKSEVRRLS 416
            |:.|::..:|: .||..|...|   .|| ||......||        |.|.:|.|.|.:.::..:
Human    20 PRRDVAVAEEV-RQAVCEARRGRPWEAP-APMKTPEAGLAGRPSPWTTPGRAAATVPAAPMQLFN 82

  Fly   417 GDISSIRDRMQSLEQQRKAFSSSKSVDVPVPPLKQRLNSLQQSVAKEEQKKPPLVALIDARQLEI 481
            |                         ..|.||                               .:
Human    83 G-------------------------GCPPPP-------------------------------PV 91

  Fly   482 MRGEEERMRQQQQKEKHSPSQTTLCAPKPAPPALIIEEPPVADTNDDSGIQEDTADELQQQQQLN 546
            :.||:.           .|....|..|.|.||.|:..|                           
Human    92 LDGEDV-----------LPDLDLLPPPPPPPPVLLPSE--------------------------- 118

  Fly   547 AAIAALALEERQLEEAANAVNQIEAEFDELTDLHPSPLPPSPALPAVQQSLQ----QPTVAQV-- 605
                    ||......|:.:..:|       .||.||.||.|..||...|:|    :|...::  
Human   119 --------EEAPAPMGASLIADLE-------QLHLSPPPPPPQAPAEGPSVQPGPLRPMEEELPP 168

  Fly   606 -PAQAVNQAAAPPLRDMEFSINEALELALQAIDREATTKPMDKAQHPQ---KREQKEELGGK--- 663
             ||:.|.:.|:..:...........|||::|:.|:         .|.|   .|..:.:|.|:   
Human   169 PPAEPVEKGASTDICAFCHKTVSPRELAVEAMKRQ---------YHAQCFTCRTCRRQLAGQSFY 224

  Fly   664 PEEKEPICEEQHDEESNEQGE 684
            .::..|:||..:.:.....|:
Human   225 QKDGRPLCEPCYQDTLERCGK 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smashNP_001246912.1 DUF4757 14..152 CDD:292571
LIM <1494..1530 CDD:278823
FBLIM1NP_001019386.1 Filamin-binding 1..70 15/51 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 41..119 25/180 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 135..176 15/40 (38%)
LIM 183..236 CDD:259829 13/61 (21%)
LIM2_FBLP-1 243..295 CDD:188758 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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