DRSC/TRiP Functional Genomics Resources

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Protein Alignment smash and esn

DIOPT Version :10

Sequence 1:NP_001246912.1 Gene:smash / 40583 FlyBaseID:FBgn0263346 Length:1541 Species:Drosophila melanogaster
Sequence 2:NP_001260760.1 Gene:esn / 53557 FlyBaseID:FBgn0263934 Length:1134 Species:Drosophila melanogaster


Alignment Length:791 Identity:152/791 - (19%)
Similarity:252/791 - (31%) Gaps:291/791 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   878 NTDTWSSDNTYETISNGT-RRH-------LQGQPEPAQPSPPIKRMNSTKRIKKEL----RNKRS 930
            ||.|..||::..|.|:|: .||       ...|.|..:..|  :.|.|.:|.::..    |.:.:
  Fly    39 NTATTISDSSTTTASSGSPTRHRSCDSLSKSSQAEAGKLFP--RNMPSIRRSRRRAVSAERERLA 101

  Fly   931 SFLGIENDGDLDDMETYLELTVAPPPDMAQL-LQEERRLEKQLYIKAGLCDSSDTGESRDSGVSE 994
            |...:|..              ..||.|.|: ..::.||       :.:...:...:|..|..|:
  Fly   102 SRERLEEQ--------------VQPPKMPQIGAGQQSRL-------STVTKLTPRKQSSKSTCSK 145

  Fly   995 NHSRQSSEHYTNSSEENDTQSEATPPPLPPPPSTAQVGEVIYQNES-------LLAAQTPLLQT- 1051
            :.....::....|:....|:.:||...|.|.....::     .|||       .:|..:..:|. 
  Fly   146 HRGNAPAKCIIKSAVRTKTKPKATTITLAPYEIALEL-----PNESPAPTLAMAVAQSSGCVQRK 205

  Fly  1052 --------VKGNSAESWTESATAAAAATQSLSEATATANAKMQSIE----------DKIREQGEM 1098
                    ..|.|....|:.....|..|.||   |.:..|::|..:          ::.|.:..:
  Fly   206 LSSEDQFHSSGISCNGETDDDVEVAMLTGSL---TPSQIARIQGQQILRYDDLRNLNRCRNRNAV 267

  Fly  1099 LRVERELLHFSQEELKRQRENLVLRENIARRELQHGAKMLMSNNRRSLQDLHHGLGIGNGMLSAF 1163
            ....::.....:.:..|::.|....:.|| .::|             |.|:...|...:|     
  Fly   268 WLNPKDTEQLLEVDKSRRKANCYFNQAIA-DDIQ-------------LSDIEEQLARFDG----- 313

  Fly  1164 QPPQHHQVQMPPP--------HPQQI---------------YANVPQQQQQMVLHAYHQMDTDYR 1205
                 |..:.|||        .|.|:               ....|||||    |.:....:.|.
  Fly   314 -----HSKRPPPPAATAPKITQPSQVIEKFKPTPAPRSSGNMQQAPQQQQ----HPHPPSSSYYT 369

  Fly  1206 KSMSDLNEFSNCLILPPTPPTKPLRAMQLNANGHGL-------EPDYAV----STRQRQPPAP-- 1257
            ::.|:|                    :|:.|.|.||       .|:.|:    ||.....|:.  
  Fly   370 QTESEL--------------------LQIEAGGTGLTFASHSQRPESAISQVASTAHLDVPSAAS 414

  Fly  1258 --YGGSLVK--IAGAP---------------MPPRLPGQGYPIQAPTAP---------------A 1288
              .|||.|.  ..|||               .||    ...|:.:..:|               .
  Fly   415 SGSGGSAVSGGSGGAPESAGRFVSPLQRRHCQPP----SHLPLNSVASPLRTASYKSAAAVAGHG 475

  Fly  1289 YHHQSAQNLSNMSRNTL------LALSATPKPKYADGWV----QVQQRKSYDSQQTSDAAWLAAQ 1343
            :||...|.| :..||:.      .||.     :|.  ||    :..|.:.|.||...|       
  Fly   476 FHHSHHQQL-DFQRNSQSDDDSGCALE-----EYT--WVPPGLRPDQVRLYFSQLPDD------- 525

  Fly  1344 QQKRKSMPDYGGALYNNNHWLLQEAEQRRIEQLNRRSIPASKSMGKPLPDSIIQTLTERVQSKGI 1408
                 .:|      |.|:     ..|:.|::||..:..|....:      ....:|::.      
  Fly   526 -----KVP------YVNS-----PGEKYRVKQLLHQLPPQDNEV------RYCHSLSDE------ 562

  Fly  1409 GDRKRFDSNGNYSQVNGNNIYQQQQQQKNVTNGSSINGNSSQGQEKVLSVSGKKKCSHCGDEL-- 1471
             :||..            .|:..|::::.:..|:            |..:|.::.|..|.:.|  
  Fly   563 -ERKEL------------RIFSAQRKREALGRGA------------VRLLSDERPCKGCEEPLSG 602

  Fly  1472 GKLCYYVGCRGAAMIIESLLLFYHINCFKCCVCHVQLGDGL----NGTDVRVRNH----KLHCQN 1528
            |.:..:....||.       |.:|..||.|.||...|.|.:    :|.....|:|    |..|..
  Fly   603 GDIVVFAQRLGAQ-------LCWHPGCFVCSVCKELLVDLIYFQRDGNLYCGRHHAETQKPRCSA 660

  Fly  1529 CYSSDDGIKFS 1539
            |    |.|.||
  Fly   661 C----DEIIFS 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smashNP_001246912.1 DUF4757 <47..153 CDD:464950
PAT1 <1159..>1335 CDD:401645 51/255 (20%)
LIM <1494..1530 CDD:395333 13/43 (30%)
esnNP_001260760.1 PET_Prickle 492..588 CDD:193602 25/162 (15%)
LIM1_Prickle 593..651 CDD:188799 17/64 (27%)
LIM2_Prickle 656..711 CDD:188802 6/16 (38%)
LIM3_Prickle 716..774 CDD:188804
Blue background indicates that the domain is not in the aligned region.

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