Protein Alignment smash and Lmcd1

DIOPT Version :9

• Sequence 1: NP_001246912.1
• Gene: smash / 40583
• FlyBaseID: FBgn0263346
• Length: 1541
• Species: Drosophila melanogaster
• Sequence 2: NP_001008562.1
• Gene: Lmcd1 / 494021
• RGDID: 1308963
• Length: 365
• Species: Rattus norvegicus
• Alignment Length: 128
• Identity: 32/128 - (25%)
• Similarity: 49/128 - (38%)
• Gaps: 34/128 - (26%)

  Fly   274 PGYDTSSSNAQASSPDLCEYTYEGAIQDYKQRVQRASSNGNGNANGKLIGEHIAYPTRRG----- 333
            |.||        ..|..|....|..::..::.|::..|...|      :|| :|.|.:.|
  Rat   162 PIYD--------QDPSRCRGLVENELKAMEEFVKQYKSEALG------VGE-VALPGQGGLPKEE 211

  Fly   334 SKIEDRLSGFEVTSPSDTQEGVEKQKVDVPKVDISKRKEIFEQAKAEVSNGGAPAAPKLVFRD 396
            :|.:::..|.|.|:|  |..|        ...|.||..|..    .|:..|.|||...:|:.|
  Rat   212 NKTQEKPEGTETTAP--TTNG--------SLGDPSKEVEYV----CELCKGVAPADSPVVYAD 260

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
smash	NP_001246912.1	DUF4757	14..152	CDD:292571
		LIM	<1494..1530	CDD:278823
Lmcd1	NP_001008562.1	PET_testin	116..203	CDD:193604	12/55 (22%)
		LIM1_Testin_like	243..300	CDD:188726	7/18 (39%)
		LIM	306..359	CDD:413332

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1704
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900