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Protein Alignment smash and Lims2
DIOPT Version :9
Sequence 1: | NP_001246912.1 |
Gene: | smash / 40583 |
FlyBaseID: | FBgn0263346 |
Length: | 1541 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001366066.1 |
Gene: | Lims2 / 225341 |
MGIID: | 2385067 |
Length: | 341 |
Species: | Mus musculus |
Alignment Length: | 98 |
Identity: | 26/98 - (26%) |
Similarity: | 44/98 - (44%) |
Gaps: | 34/98 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 1460 GKKKCSH------------CGDELGKLCYYVGCRGAAMIIESLLLFYHINCFKCCVCHVQLGD-G 1511
|:|.|.| ||: :.:| .:|:::...:|..||:|.:|.|:|.| |
Mouse 60 GRKYCEHDFQMLFAPCCGFCGE------FVIG-----RVIKAMNANWHPGCFRCELCDVELADLG 113
Fly 1512 LNGTDVRVRNHKLH-CQNCYSSD--DGI-KFSC 1540
. |:|...| |:.|::.: .|: ||.|
Mouse 114 F------VKNAGRHLCRPCHNREKAKGLGKFIC 140
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG1704 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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