DRSC/TRiP Functional Genomics Resources

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Protein Alignment smash and Tes

DIOPT Version :10

Sequence 1:NP_001246912.1 Gene:smash / 40583 FlyBaseID:FBgn0263346 Length:1541 Species:Drosophila melanogaster
Sequence 2:NP_997059.1 Gene:Tes / 21753 MGIID:105081 Length:419 Species:Mus musculus


Alignment Length:237 Identity:47/237 - (19%)
Similarity:82/237 - (34%) Gaps:79/237 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1367 EAEQRRIEQLNRRSIPA---SKSMGKPLPDSIIQTLTERV-----QSKGIGDRKRFDSNGNYSQV 1423
            |..|.|.:|| .:.:||   ..|....|....::.:.:.|     ::.|:||.| |.|..|   .
Mouse   141 EGAQYRKKQL-AKQLPAHDQDPSKCHELSPKEVKEMEQFVKKYKSEALGVGDVK-FPSEMN---A 200

  Fly  1424 NGNNIY----------------QQQQQQKNVTNGSSINGNSSQGQEKVLSV-SGKKK-------- 1463
            .|:.::                :..:.:|...:........::|:..:.:. :|..|        
Mouse   201 QGDKVHNPAGNRHAPAAVASKDKSAESKKTQYSCYCCKHTMNEGEPAIYAERAGYDKLWHPACFI 265

  Fly  1464 CSHCGDELGKLCY-------YVG----------CRGAAMIIESLLLF-----------YHINCFK 1500
            ||.||:.|..:.|       |.|          |.|.     ..|:|           :|:..|.
Mouse   266 CSTCGELLVDMIYFWKNGKLYCGRHYCDSEKPRCAGC-----DELIFSNEYTQAENQNWHLKHFC 325

  Fly  1501 CCVC--------HVQLGDGLNGTDVRVRNHKLHCQNCYSSDD 1534
            |..|        :|.:.|........|:||.:.||.|:::.|
Mouse   326 CFDCDHILAGKIYVMVTDKPVCKPCYVKNHAVVCQGCHNAID 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smashNP_001246912.1 DUF4757 <47..153 CDD:464950
PAT1 <1159..>1335 CDD:401645
LIM <1494..1530 CDD:395333 11/43 (26%)
TesNP_997059.1 PET_testin 109..196 CDD:193604 15/56 (27%)
LIM1_Testin 234..291 CDD:188797 11/56 (20%)
LIM2_Testin 297..352 CDD:188800 10/59 (17%)
LIM3_Testin 359..417 CDD:188803 4/9 (44%)
Blue background indicates that the domain is not in the aligned region.

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