DRSC/TRiP Functional Genomics Resources

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Protein Alignment smash and tes-1

DIOPT Version :10

Sequence 1:NP_001246912.1 Gene:smash / 40583 FlyBaseID:FBgn0263346 Length:1541 Species:Drosophila melanogaster
Sequence 2:NP_501190.1 Gene:tes-1 / 177515 WormBaseID:WBGene00015217 Length:465 Species:Caenorhabditis elegans


Alignment Length:425 Identity:81/425 - (19%)
Similarity:139/425 - (32%) Gaps:164/425 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  1153 LGIGNGMLSAFQPPQHHQVQMPPPHPQQIYANVPQ-QQQQMVLHAYHQM--DTDYRKSMSDL--- 1211
            ||:|...:.|....|..|.:           |:|. :.:.:.||.:.:|  :...|....|:   
 Worm    24 LGLGKQHILAHDIGQGSQCR-----------NLPTCRCEGLDLHFWRKMCKNCGCRMDEHDVVLP 77

  Fly  1212 NEFSNCLIL-------------PPTPP--TKPLRAMQLNANGHGLEPDYAVSTRQRQPPAPY--- 1258
            |||.:..|:             ..|.|  .||....:...|.       .:|||. ||.|.|   
 Worm    78 NEFDHAQIVIGRLFGAREHFEKVLTKPGMYKPNEQNETKENN-------MMSTRS-QPTAVYNYK 134

  Fly  1259 ----------GGS----LVKIAGAPMPPRLPGQGYPIQAPTAPAYHHQSAQNLSNMSRNTLLALS 1309
                      |||    .|:.|.||:|.:                         |:....:.||.
 Worm   135 MASSDSESERGGSNNKENVQYAWAPLPDK-------------------------NLVSRYMKALP 174

  Fly  1310 ATPKPKYADGWVQVQQRKSYDSQQTSDAAWLAAQQQKRKSMPDYGGALYNNNHWLLQEAEQRRIE 1374
            ...:|...                       :..:|.|||...:...||:.|   :::|  |.:|
 Worm   175 EDERPLVG-----------------------SKGEQNRKSRLQFQLPLYDCN---VEDA--RFVE 211

  Fly  1375 QLNRRSIPASKSMGKPLPDSIIQTLTERVQSKGIGDRKRFD---SNGNYSQVNGNNIYQQQQQQK 1436
            :.:.::               :|...|.|::..||..:..:   .:.||......|.:     :|
 Worm   212 EKDVKT---------------LQNFVENVRNNVIGVGRVVEIGKDSDNYGDNENTNEF-----EK 256

  Fly  1437 NVTNGSSINGNSSQGQEKVLSVSGKKKCSHCGD-----ELGKLCYYVGCRGAAMIIESLLLFYHI 1496
            ::|  :::.|         |.: |:..|..|.:     ::|..|::          .|....||.
 Worm   257 SMT--AALKG---------LKI-GETDCKDCNEMMETGDIGVECHH----------HSTTDTYHP 299

  Fly  1497 NCFKCCVCHVQLGDGLNGTDVRVRNHKLHCQNCYS 1531
            |||:|..|...|.|.:    .....:|.:|...|:
 Worm   300 NCFRCETCRQLLVDNI----YFFYKNKYYCGRHYA 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smashNP_001246912.1 DUF4757 <47..153 CDD:464950
PAT1 <1159..>1335 CDD:401645 38/213 (18%)
LIM <1494..1530 CDD:395333 11/35 (31%)
tes-1NP_501190.1 PET_testin 153..239 CDD:193604 24/153 (16%)
LIM1_Testin_like 272..329 CDD:188726 16/70 (23%)
LIM2_Testin_like 335..389 CDD:188727
LIM3_Testin_like 397..453 CDD:188728
Blue background indicates that the domain is not in the aligned region.

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