Sequence 1: | NP_001246912.1 | Gene: | smash / 40583 | FlyBaseID: | FBgn0263346 | Length: | 1541 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004911274.2 | Gene: | limch1 / 100127553 | XenbaseID: | XB-GENE-5950305 | Length: | 1924 | Species: | Xenopus tropicalis |
Alignment Length: | 1872 | Identity: | 360/1872 - (19%) |
---|---|---|---|
Similarity: | 621/1872 - (33%) | Gaps: | 633/1872 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 91 KKLKEVKKEEP----------------EEWQNNLDNWKSSRRKRVEHIIDRAVETKKLELEEHDR 139
Fly 140 LRRKSKTFTEMMEERAERGGPRGRAKLASLAVYNEDETNDLSDLGIGTSSASGKSSLSGDYDNNS 204
Fly 205 VMSDHAAELDKAIGAASSVAAGVTAQNVDEQLNHINRNGSNGNHGNGAAVGQTG-----PSNSSK 264
Fly 265 SAGRQYISSPG---------YDTSSSNAQ--ASSPDLC---EYT----YEGAIQD---------- 301
Fly 302 ----------------------YKQRVQRASSNGNGNANGKLIGEHIAYPTRRGSKIEDRLSGFE 344
Fly 345 ---------------VTSPSDTQEG--VEKQKV-DVPKVDISKRKEIFEQAKAEVSNGGAPAAPK 391
Fly 392 LVFRDGLTNGNSATTAPKSEVRRLSGDISSIRDRMQSLEQQRKAFSSSKSVDVPVPPLKQRLNSL 456
Fly 457 QQSVAKEEQK----KPPLVALID--------------ARQLEIMRG-------------EEERMR 490
Fly 491 QQQQKEKHS----PSQTTLCAPK----PAPP-----ALIIEE-------------PPVADTNDDS 529
Fly 530 GIQEDTADELQQQQQLNAAIAALALEERQ--------------LEEAANAVNQI----------- 569
Fly 570 ---EAEFDELTDLHPSPL----PPSPALPAVQQSLQQPTVAQVPAQAVNQAAAPPLRDMEFSINE 627
Fly 628 ALELALQAIDREATTKPMD-------KAQHPQKREQKE--ELGGKP-EEKEPICEEQHDEESNEQ 682
Fly 683 GETHNEGGEMP--NKTDKQMQGGRE------------------PIYENVSSTISM---------- 717
Fly 718 -------HEVDNEQIATMTITTQTQATRISHRRSIPSQQTSNSNENNQSTNQTSNSRNQKESSTA 775
Fly 776 ATSAANPVPPTTPGEQAEPYYQVPKATEPYYDAPKHLRPVPVYENVEIFYSGLEISQG------- 833
Fly 834 ---------------SV----GAPVGLMEPPKEKPPPPPTESPIPLDEGHDDELDGLGNSLGHNT 879
Fly 880 DTWSSDNTYETISNGTRRHLQGQPEPAQPSPPIKRMNSTKRIKKELRNKRSSFLGIENDGDLDD- 943
Fly 944 ---METYLELTVAPPPDMAQLLQEERRLEKQLYIKAGLCDSSDTGESRDSGVSENHSRQSSEHYT 1005
Fly 1006 NSSEENDTQSEATPPPLPPPPSTAQVGEVIYQNES-----LLAAQTP-LLQTVKGNSAESWTESA 1064
Fly 1065 TAAAAATQS------------------LSEATATANAKMQSIEDKIREQGEMLRVEREL-LHFSQ 1110
Fly 1111 EELKRQRENLVLRENIARRELQHGAKML---MSNNRRSLQDLHHGLGIGNGMLSAFQPP------ 1166
Fly 1167 QHH---------QVQMPPPHPQQIYANVPQQQQQMVLHAYHQMDTDYRKSMSDLNEFSNCLILPP 1222
Fly 1223 -------TPPTKPLRAMQLNANGHGLEPDYAVSTRQRQPPAPYGGSLVKIAGAPMPPRLPGQGYP 1280
Fly 1281 IQAPTAPAYHHQSAQNLSNMSRN---------------------TLLALSATP----------KP 1314
Fly 1315 KYADGWVQVQQR---KSYDSQQTS-DAAWLAAQ-----------QQKRKSMPD------------ 1352
Fly 1353 -----------YGGAL--------YNNNHWLLQEAEQRRIEQLNRRSIPASKSMGKPLPDSIIQT 1398
Fly 1399 LTERVQSKG----------IGDRKRFDSNGNYSQVNGNNIYQQQQQQKNVTNG-SSING------ 1446
Fly 1447 ----------------------------NSSQG-----QEKVLSVSGKKKCSHCGDELGKLCYYV 1478
Fly 1479 GCRGAAMIIESLLLFYHINCFKCCVCHVQLGDGLNGTDVRVRNHKLHCQNCY 1530 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
smash | NP_001246912.1 | DUF4757 | 14..152 | CDD:292571 | 14/76 (18%) |
LIM | <1494..1530 | CDD:278823 | 20/35 (57%) | ||
limch1 | XP_004911274.2 | CH_LIMCH1 | 23..140 | CDD:409127 | |
DUF4757 | 250..>313 | CDD:406382 | 14/79 (18%) | ||
DUF4757 | <1125..1230 | CDD:406382 | 27/141 (19%) | ||
LIM | 1852..1909 | CDD:214528 | 36/64 (56%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0007310 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |