DRSC/TRiP Functional Genomics Resources

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Protein Alignment Karybeta3 and KAP123

DIOPT Version :9

Sequence 1:NP_001262259.1 Gene:Karybeta3 / 40581 FlyBaseID:FBgn0087013 Length:1105 Species:Drosophila melanogaster
Sequence 2:NP_011035.1 Gene:KAP123 / 856846 SGDID:S000000912 Length:1113 Species:Saccharomyces cerevisiae


Alignment Length:1152 Identity:281/1152 - (24%)
Similarity:477/1152 - (41%) Gaps:181/1152 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DQAHFQQLLASLLSTDNDVRQQAEEAYNNLSREL--------KVTHLLGNIQNGQQSEEARQMAA 60
            ||....||..:|.:..:.|  ..:||...|..:.        .:.|:|   ||| ..:..:|:|.
Yeast     2 DQQFLSQLEQTLHAITSGV--GLKEATKTLQTQFYTQPTTLPALIHIL---QNG-SDDSLKQLAG 60

  Fly    61 VLLRRLFTTEFFDFYKGLPAESQNQLLQQILLAVQQEVTPQLRRKICEVVAEVARNLIDEDCNNQ 125
            |..|:|.:..:....:...|..:..|||...    .|....:|.....|:|.:....:|   .|:
Yeast    61 VEARKLVSKHWNAIDESTRASIKTSLLQTAF----SEPKENVRHSNARVIASIGTEELD---GNK 118

  Fly   126 WPDILQFLFQCANSPTPQLQESALRIFSSVPSIFGNQEAQYIDLIKQMLAKSMDAGSDPEVR--- 187
            |||::..|.|.|:....|.:::|:.|..|:...|.:..:.:||....:.:::::..|..|:|   
Yeast   119 WPDLVPNLIQTASGEDVQTRQTAIFILFSLLEDFTSSLSGHIDDFLALFSQTINDPSSLEIRSLS 183

  Fly   188 VQAVRAVGAFILYHDKENETAIHKHFADMLPRMIHITGETIEAQDDQSLLKLLIEMTENCPK--- 249
            .||:..|.|.|...:..|.....| ||..:|.::::....|:| ||....||:.    ||..   
Yeast   184 AQALNHVSALIEEQETINPVQAQK-FAASIPSVVNVLDAVIKA-DDTMNAKLIF----NCLNDFL 242

  Fly   250 FLRPQL--EFI---FEVCMKVFSSQDFEDSWRHLVLEVMVSLAENAPSMI--RKRADKYIVALIP 307
            .|..||  .||   .::.:::..:.:.::..|...|:.::|......|.:  .|...:..||.:.
Yeast   243 LLDSQLTGNFIVDLIKLSLQIAVNSEIDEDVRVFALQFIISSLSYRKSKVSQSKLGPEITVAALK 307

  Fly   308 LILHMMTDLDDDENWSTADVVDDDDHSDN--NVIAESSLDRLACG---LGGKIVLPLVMNALPVM 367
            :....: |:||:.|       ::|:..:|  |..:.|::..||..   |....|..:::..:|.|
Yeast   308 VACEEI-DVDDELN-------NEDETGENEENTPSSSAIRLLAFASSELPPSQVASVIVEHIPAM 364

  Fly   368 LGHADWKHRFAALMAISAIGEGCHKQMEAILDEVMSGVLNFLSDPHPRVRYAACNAIGQMSTDFA 432
            |..|:...|.|.|:|||....|....:.:..|:::...:|.|.|..|.|:.||...|.|::||. 
Yeast   365 LQSANVFERRAILLAISVAVTGSPDYILSQFDKIIPATINGLKDTEPIVKLAALKCIHQLTTDL- 428

  Fly   433 QTFEKKFHSQVIPGLLSLLDDVENPRVQAHAGAALVNFSEDCPKNILTRYLDGIMAKLETILNSK 497
            |....|||.:.:|.::.::|..:|..:..:|..||....|....:.:.:|||.:|.||..:|.| 
Yeast   429 QDEVAKFHEEYLPLIIDIIDSAKNIVIYNYATVALDGLLEFIAYDAIAKYLDPLMNKLFYMLES- 492

  Fly   498 FKELVEKGNKLVLEQVVTTIASVADTCESEFVAYYDRLMPCLKFIIQNA------NSDDLRMLRG 556
                 .:.:||.. .||:.|.|.|....|.|:.|:...:..|:..|||.      :.||:. ||.
Yeast   493 -----NESSKLRC-AVVSAIGSAAFAAGSAFIPYFKTSVHYLEKFIQNCSQIEGMSEDDIE-LRA 550

  Fly   557 KTIECVSLIGLAVGREKFIGDAGEVMDMLLVN------HTEGGELADDDPQTSYLITAWARMCKI 615
            .|.|.:|.:..||..:.|...|..     |||      .|:...|.    ::.|...  |.:.|:
Yeast   551 NTFENISTMARAVRSDAFAEFAEP-----LVNSAYEAIKTDSARLR----ESGYAFI--ANLAKV 604

  Fly   616 LGKQFEQYLPLVMGPVMRTATMKPEVAMLDNDEVE-DIDGDVD-----WSFINLGEQQN-FAIRT 673
            .|:.|..:|..::..:.:|         |:.||.: :.|||.:     ....|..|.|| |.:.|
Yeast   605 YGENFAPFLKTILPEIFKT---------LELDEYQFNFDGDAEDLAAFADSANEEELQNKFTVNT 660

  Fly   674 AGMDDKASACEMLVCYARELKEGFAEYAEDVVRQMLPMLKFYFHD--GVRTAAAESL----PYLL 732
            ....:|..|...|...|...||.|..|.|    |.|.:|.....:  |:|..|..::    ..:|
Yeast   661 GISYEKEVASAALSELALGTKEHFLPYVE----QSLKVLNEQVDESYGLRETALNTIWNVVKSVL 721

  Fly   733 DCAKIKGPQYLEGM--WMFICPELLKVIVT-----------EPEPDVQSELLNSLAKCIETLGPN 784
            ..:|::...|.:|:  ..::..::|.||..           |.|..:...::...|..|:..|..
Yeast   722 LASKVEPESYPKGIPASSYVNADVLAVIQAARETSMGNLSDEFETSMVITVMEDFANMIKQFGAI 786

  Fly   785 CLNEDAMKQVLEIINKYVLEHFERADKRLAARNEEDYDDGVEEELAEQDDT--DVYILSKIVDIT 847
            .:.::....:||.:...||...:..........|||.....|.:.:|.:.|  || .|..:|.::
Yeast   787 IIMDNGDSSMLEALCMQVLSVLKGTHTCQTIDIEEDVPRDEELDASETEATLQDV-ALEVLVSLS 850

  Fly   848 HALFQTNKAQFLPAFEQVAPHFVKLLEPSRPVADRQWGLCVFDDLIE-----FCGPACA------ 901
            .||               |..|.|:.:..|||.   :||  |....:     ..|.|..      
Yeast   851 QAL---------------AGDFAKVFDNFRPVV---FGL--FQSKSKNKRSSAVGAASELALGMK 895

  Fly   902 ---PYQQIFTPALV-QYVCDKAPEVRQAAAYGCGVLGQFAGEQFAHTCAQIIPLLVQVIN--DPK 960
               |:......||| :...||:.|||..||||.|:|.::|....:.....::..|.::::  |.|
Yeast   896 EQNPFVHEMLEALVIRLTSDKSLEVRGNAAYGVGLLCEYASMDISAVYEPVLKALYELLSAADQK 960

  Fly   961 AREIENISPTENAIS-AFAKI------LKYNNSALSNVDELIGVWFSWLPVSEDSEEAAHIYGYL 1018
            |...|:...|...|. |:|..      :...||||..:::.:....:.||::...||...|:..:
Yeast   961 ALAAEDDEATREIIDRAYANASGCVARMALKNSALVPLEQTVPALLAHLPLNTGFEEYNPIFELI 1025

  Fly  1019 CDLIEGNHPVILGANNGNLPRIVSIIAESFCTK-----VVEAQSATG 1060
            ..|.:.|.|||    ....|||:.|.:..| ||     .:|.:|..|
Yeast  1026 MKLYQENSPVI----TNETPRIIEIFSAVF-TKENDRIKLEKESTLG 1067

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Karybeta3NP_001262259.1 HEAT repeat 129..157 CDD:293787 7/27 (26%)
HEAT repeat 165..216 CDD:293787 14/53 (26%)
HEAT repeat 235..261 CDD:293787 9/33 (27%)
HEAT repeat 272..305 CDD:293787 6/34 (18%)
HEAT repeat 357..385 CDD:293787 9/27 (33%)
HEAT_2 364..467 CDD:290374 31/102 (30%)
HEAT_EZ 373..427 CDD:290247 16/53 (30%)
HEAT repeat 401..429 CDD:293787 9/27 (33%)
ARM 405..503 CDD:237987 30/97 (31%)
HEAT repeat 442..473 CDD:293787 6/30 (20%)
HEAT repeat 485..519 CDD:293787 10/33 (30%)
HEAT repeat 532..565 CDD:293787 11/38 (29%)
HEAT repeat 867..894 CDD:293787 8/26 (31%)
HEAT repeat 906..936 CDD:293787 14/30 (47%)
HEAT repeat 947..979 CDD:293787 8/34 (24%)
KAP123NP_011035.1 IBN_N 25..92 CDD:197981 16/74 (22%)
HEAT repeat 40..65 CDD:293787 8/28 (29%)
HEAT repeat 77..111 CDD:293787 8/37 (22%)
HEAT repeat 121..151 CDD:293787 8/29 (28%)
HEAT repeat 162..189 CDD:293787 5/26 (19%)
HEAT repeat 352..385 CDD:293787 11/32 (34%)
HEAT repeat 397..427 CDD:293787 9/29 (31%)
HEAT repeat 438..468 CDD:293787 6/29 (21%)
HEAT repeat 479..506 CDD:293787 11/33 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2171
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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