DRSC/TRiP Functional Genomics Resources

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Protein Alignment Karybeta3 and ipo4

DIOPT Version :9

Sequence 1:NP_001262259.1 Gene:Karybeta3 / 40581 FlyBaseID:FBgn0087013 Length:1105 Species:Drosophila melanogaster
Sequence 2:NP_001008011.2 Gene:ipo4 / 493373 XenbaseID:XB-GENE-493034 Length:1076 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Karybeta3NP_001262259.1 HEAT repeat 129..157 CDD:293787
HEAT repeat 165..216 CDD:293787
HEAT repeat 235..261 CDD:293787
HEAT repeat 272..305 CDD:293787
HEAT repeat 357..385 CDD:293787
HEAT_2 364..467 CDD:290374
HEAT_EZ 373..427 CDD:290247
HEAT repeat 401..429 CDD:293787
ARM 405..503 CDD:237987
HEAT repeat 442..473 CDD:293787
HEAT repeat 485..519 CDD:293787
HEAT repeat 532..565 CDD:293787
HEAT repeat 867..894 CDD:293787
HEAT repeat 906..936 CDD:293787
HEAT repeat 947..979 CDD:293787
ipo4NP_001008011.2 IBN_N 23..89 CDD:197981
HEAT repeat 350..378 CDD:293787
HEAT_EZ 363..418 CDD:290247
HEAT repeat 388..421 CDD:293787
HEAT repeat 432..461 CDD:293787
HEAT repeat 474..504 CDD:293787
HEAT repeat 693..737 CDD:293787
HEAT repeat 746..773 CDD:293787
HEAT repeat 853..882 CDD:293787
HEAT repeat 894..924 CDD:293787
HEAT repeat 933..962 CDD:293787
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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