DRSC/TRiP Functional Genomics Resources

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Protein Alignment Karybeta3 and CG8219

DIOPT Version :9

Sequence 1:NP_001262259.1 Gene:Karybeta3 / 40581 FlyBaseID:FBgn0087013 Length:1105 Species:Drosophila melanogaster
Sequence 2:NP_648038.1 Gene:CG8219 / 38722 FlyBaseID:FBgn0035693 Length:853 Species:Drosophila melanogaster


Alignment Length:920 Identity:180/920 - (19%)
Similarity:331/920 - (35%) Gaps:252/920 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 QSEEARQMAAVLLRRLFTTEFFDFYKGLPAESQNQLLQQILLAVQQEVTPQLRRKICEVVAEVAR 115
            ::|..|.|:.::|:.  .....|.  .|..|....:..|.|.|| .:.:|::|..:..::..:|.
  Fly    35 ENEATRSMSGLILKN--NIRMHDI--TLQPEHLEYIKHQCLQAV-GDSSPEIRGTVGILITTIAS 94

  Fly   116 NLIDEDCNNQWPDILQFLFQCANSPTPQLQESALRIFSSVPSIFGNQEAQYIDL-IKQMLAKSMD 179
            |:   ..:| ||.:|..|.:..::....:.|.|   ||::..|..:......:: :..|:.|.::
  Fly    95 NI---GLHN-WPQLLPSLCEMLDNQDYNVCEGA---FSALQKICEDSAGILENMPLNTMIPKFLE 152

  Fly   180 --AGSDPEVRVQAVRAVGAFILYHDK------------------ENETAIHKHFADMLPRMIHIT 224
              ..|.|::|..|:..:..||:...:                  :|:.|:..:....|   :.:.
  Fly   153 YFKHSSPKIRSHAIACINQFIINRSQALMLNIDSLIQNLLDVPSDNDPAVRMNVCHAL---VGLV 214

  Fly   225 GETIEAQDDQSLLKLLIEMTENCPKFLRPQLEFIFEVCMKVFSSQDFEDSWRHLVLEVMVSLAEN 289
            |..|:                    .:.|.:..|.|:.:  ..|||.:::......|..:||.:.
  Fly   215 GVRID--------------------LMMPHMSQIIELIL--LRSQDADENVALQATEFWLSLGKQ 257

  Fly   290 APSMIRKRADKYIVALIPLILHMMTDLDDDENWSTADVVDDDD-----------------HSDNN 337
              ...|......:..|:|:::......:.|......||.:||.                 |..:|
  Fly   258 --RNCRDILSPILSQLVPVLVSRTQYTETDIILLKGDVGEDDKEPDRQQDISPRFHMSRVHGISN 320

  Fly   338 VIAESSLDRL-----------ACGLG------GKIVLPLVMNALPVMLGHADWKHRFAALMAISA 385
            .:.|:|.|.:           ||.|.      |.:.|||::..|...|.|.:|..:.:.:||:.|
  Fly   321 ELDENSDDDMWDSALNLRKCSACALDIISKIFGDVCLPLMLPILKEALFHQEWVIKESGVMALGA 385

  Fly   386 IGEGCHKQMEAILDEVMSGVLNFLSDPHPRVRYAACNAIGQMSTDFAQTFEKKFHSQVIPGLLSL 450
            |.|||.:.:...|.|::..::..|||..|.||...|....:...........|:...:|..||..
  Fly   386 IAEGCMQGLIPHLPELIPYLITCLSDKKPLVRSITCWTFMRFPKWVLNQPHDKYLEPLIEELLKC 450

  Fly   451 LDDVENPRVQAHAGAALVNFSED-CPKNILTRYLDGIMAKLETILNSKFKE-------------- 500
            :.| .|.|||..|.:|.|...|: |.:  |..||:. |.|...:..||:.:              
  Fly   451 ILD-SNKRVQEAACSAFVALEEEACTQ--LVPYLEN-MLKTFVLAFSKYHQRNLLIMYDVVGLLA 511

  Fly   501 -------------------LVEKGNKLVLEQ------VVTTIASVADTCESEFVAYYDRLMPCLK 540
                               |::|.| ||.:.      ::..::|:|...:|.|:.|.|.:.....
  Fly   512 ESVGHHLNKPQYIDILMPPLMDKWN-LVKDDDKDIIYLLECLSSIATALQSSFLPYCDSVYRKGI 575

  Fly   541 FIIQNANSDDLRMLRGKT------------IECVSLIGLAVGREKFIGD--------------AG 579
            .||:...:.|:...:.::            ::.||  ||..|.:..|..              .|
  Fly   576 SIIEETINQDMMCKQSQSTDYPDKERMVIALDLVS--GLIEGLQSLIEPLVANSKLLQLLCQCMG 638

  Fly   580 EVM------DMLLVNHTEGGELADDDPQTSYLI-----------------TAWA--RMCKILGKQ 619
            :||      ...|:....|...:...|.|::.|                 ..||  ::|..||::
  Fly   639 DVMPEVRQSSFALLGDLSGACFSQVYPYTAHFILILVQNLNPSVVGVCNNAVWAIGQICVKLGEE 703

  Fly   620 FEQYLPLVMGPVMRTATMKPEVAMLDNDEVEDIDGDVDWSFINLGEQQNFAIRTAGMDDKASACE 684
            .:.|:.|::..:|        :.|...|..:::..:   :.|.||...|             || 
  Fly   704 TKPYVRLLLSELM--------ILMNRQDIPKNLSRN---AAITLGRLGN-------------AC- 743

  Fly   685 MLVCYARELKEGFAEYAEDVVRQMLPMLKF-YFHDGVRTAAAESLPYLLDCAKIK-GPQYLEGMW 747
                     .:..|.|..:.:||...:|:: |.||      .:.|.::..|..|: .|..:...:
  Fly   744 ---------PDEVAPYLPEFLRQWCLLLRYAYDHD------EKYLSFMGMCHMIRENPGGVVPDF 793

  Fly   748 MFICPELLKVIVTEPEPDVQSELLNSLAKCIETLGPNCLNEDAMKQVLEIINKYVLEHFERADKR 812
            :|.|    ..|.:...|  ..:|...:.:.||    ...|:...:..|..:.|:        .:.
  Fly   794 LFFC----DAIASWDNP--PQDLRQMIRRIIE----GFKNQTGAENWLIFLGKF--------PQP 840

  Fly   813 LAARNEEDYD 822
            ||.|..|.||
  Fly   841 LACRLIELYD 850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Karybeta3NP_001262259.1 HEAT repeat 129..157 CDD:293787 6/27 (22%)
HEAT repeat 165..216 CDD:293787 10/71 (14%)
HEAT repeat 235..261 CDD:293787 2/25 (8%)
HEAT repeat 272..305 CDD:293787 4/32 (13%)
HEAT repeat 357..385 CDD:293787 9/27 (33%)
HEAT_2 364..467 CDD:290374 30/102 (29%)
HEAT_EZ 373..427 CDD:290247 17/53 (32%)
HEAT repeat 401..429 CDD:293787 7/27 (26%)
ARM 405..503 CDD:237987 29/131 (22%)
HEAT repeat 442..473 CDD:293787 11/30 (37%)
HEAT repeat 485..519 CDD:293787 9/72 (13%)
HEAT repeat 532..565 CDD:293787 6/44 (14%)
HEAT repeat 867..894 CDD:293787
HEAT repeat 906..936 CDD:293787
HEAT repeat 947..979 CDD:293787
CG8219NP_648038.1 IBN_N 11..76 CDD:281761 11/45 (24%)
ARM 104..214 CDD:237987 18/115 (16%)
HEAT repeat 104..132 CDD:293787 7/30 (23%)
HEAT repeat 145..175 CDD:293787 8/29 (28%)
HEAT repeat 186..212 CDD:293787 3/28 (11%)
HEAT repeat 225..254 CDD:293787 6/30 (20%)
HEAT repeat 360..388 CDD:293787 8/27 (30%)
HEAT_2 361..465 CDD:290374 30/104 (29%)
HEAT_EZ 373..424 CDD:290247 17/50 (34%)
HEAT repeat 400..430 CDD:293787 8/29 (28%)
HEAT repeat 442..468 CDD:293787 10/26 (38%)
HEAT repeat 629..657 CDD:293787 4/27 (15%)
HEAT_EZ 642..696 CDD:290247 7/53 (13%)
HEAT repeat 667..699 CDD:293787 5/31 (16%)
HEAT repeat 710..738 CDD:293787 6/38 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438712
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10527
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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