DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Karybeta3 and Tnpo

DIOPT Version :10

Sequence 1:NP_524226.1 Gene:Karybeta3 / 40581 FlyBaseID:FBgn0087013 Length:1105 Species:Drosophila melanogaster
Sequence 2:NP_477368.1 Gene:Tnpo / 38721 FlyBaseID:FBgn0024921 Length:893 Species:Drosophila melanogaster


Alignment Length:1182 Identity:211/1182 - (17%)
Similarity:387/1182 - (32%) Gaps:408/1182 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QQLLASL-------LSTDNDVRQQAEE-----AYNNLSRELKVTHLLGNIQNGQQSEEARQMAAV 61
            ||::|.|       .:|...|:.:.||     .:||.     :.::|..::.  :.|..|.::.:
  Fly    11 QQIIAILKESQSPDTATQMAVQMKLEEFNRYPDFNNY-----LIYVLTKLKT--EDEPTRSLSGL 68

  Fly    62 LLR---RLFTT----EFFDFYKGLPAESQNQLLQQILLAVQQEVTPQLRRKICEVVAEVARNLID 119
            :|:   |:..|    |..::.|       ::.||.:     .:.:|.:|..:..::..:|.|   
  Fly    69 ILKNNIRMHGTTLQPEIVEYIK-------HECLQAV-----GDASPLIRATVGILITTIASN--- 118

  Fly   120 EDCNNQWPDILQFLFQCANSPTPQLQESALRIFSSVPSIFGNQEAQYIDL------IKQMLAKSM 178
             ...:.||.:|..|.:..::....:.|.|   ||::..|. ...|:.:|.      :..|:.|.:
  Fly   119 -GGLHNWPQLLPSLCEMLDNQDYNVCEGA---FSALQKIC-EDSAEILDSAALNRPLNIMIPKFL 178

  Fly   179 D--AGSDPEVRVQAVRAVGAFILYHDKENETAIHKHFADMLPRMIHITGETIEAQDDQSLLK--- 238
            :  ..|.|::|..|:..:..||:    ....|:..:....:..:.|::.:     :|..:.|   
  Fly   179 EYFKHSSPKIRSHAIACINQFII----NRSQALMLNIDSFIENLFHLSSD-----EDHEVRKNVC 234

  Fly   239 ----LLIEMTENCPKFLRPQLEFIFEVCMKVFSSQDFEDSWRHLVLEVMVSLAENAPSMIRKRAD 299
                :|:|:..:   .|.|.:..|.|..:  ..:||.::.......|..:||||.  |:.:....
  Fly   235 HGLVMLLEVRMD---RLMPHMSQIIEYML--LRTQDTDEGVALEASEFWLSLAEQ--SICKDVLA 292

  Fly   300 KYIVALIPLILH--------------------MMTDLDDD-----------------ENWSTADV 327
            .|:..|.|:::.                    |:.|.::|                 |..:.|..
  Fly   293 PYLAQLAPVLVRGMRYSEVDIILLKGNVEEDDMVPDREEDIRPRFHKSRAHTIRSTQEGGAGATG 357

  Fly   328 VDDDDHSDNNVIAESSLDR---LACGLGGKIV---------LPLVMNALPVMLGHADWKHRFAAL 380
            .||||..::.:..:|||..   ..|......|         ||:|:..|...|.|.:|..:.:.:
  Fly   358 DDDDDEFEDGMDDDSSLSEWNLRKCSAAALDVLANVFREDCLPVVLPILKETLFHQEWVIKESGV 422

  Fly   381 MAISAIGEGCHKQMEAILDEVMSGVLNFLSDPHPRVRYAACNAIGQMSTDFAQTFEKKFHSQVIP 445
            :|:.||.|||.:.|...|.|::..:::.|||....||...|..:.:    :|.....:.|.|.:.
  Fly   423 LALGAIAEGCMQGMIQHLPELIPYLISCLSDKKALVRSITCWTLSR----YANWVVNQPHDQYLK 483

  Fly   446 GLLSLLDDVENPRVQAHAGAALVNFSEDCPKNILTRYLDGIMAKLETILNSKFKELVEKGNKLVL 510
            .|:                           :.:|.|.||                    .||.|.
  Fly   484 PLM---------------------------EELLKRILD--------------------SNKRVQ 501

  Fly   511 EQVVTTIASVADTCESEFVAYYDRLMPCLKFII---QNANSDDLRMLRGKTIECVSLIGLAVGRE 572
            |...:..|::.:...:|.|.|.:.::..|.|..   |:.|                         
  Fly   502 EAACSAFATLEEEACTELVPYLEYILKTLVFAFSKYQHKN------------------------- 541

  Fly   573 KFIGDAGEVMDMLLVNHTEGGELADDDPQTSYLITAWARMCKILGKQFE--QYLPLVMGPVMRTA 635
                        ||:.:...|.|||.                 :|....  ||:.::|.|:    
  Fly   542 ------------LLILYDAVGTLADS-----------------VGHHLNKPQYIDILMPPL---- 573

  Fly   636 TMKPEVAMLDNDEVEDIDGDVDWSFINLGEQQNFAIRTAGMDDKASACEMLVC---YARELKEGF 697
                            ||   .|:.:.              ||......:|.|   .|..|:.||
  Fly   574 ----------------ID---KWNLLK--------------DDDKDLFPLLECLSSIATALQSGF 605

  Fly   698 AEYAEDVVRQMLPMLKFYFHDGVRTAAAESLPYLLDCAKIKGPQYLEGMWMFICPELLKVIVTEP 762
            ..|.:.|.|:.:.:::       :|...|.|     |.:.:...:         |:..::||.  
  Fly   606 LPYCDPVYRRCISLIE-------QTINQEML-----CKQNQTYDH---------PDKERMIVA-- 647

  Fly   763 EPDVQSELLNSLAKCIETLGPNCLNEDAMKQVLEIINKYVLEHFERADKRLAARNEEDYDDGVEE 827
             .|:.|.|...|.:.||||..|.                                          
  Fly   648 -LDLLSGLAEGLDRHIETLVANS------------------------------------------ 669

  Fly   828 ELAEQDDTDVYILSKIVDITHALFQTNKAQFLPAFEQVAPHFVKLLEPSRPVADRQWGLCVFDDL 892
                             :|.|.|:|        ..:.|.|..            ||....:..||
  Fly   670 -----------------NIMHLLYQ--------CMQDVLPEV------------RQSSFALLGDL 697

  Fly   893 IEFCGPACAPYQQIFTPALVQYVCDKAPEVRQAAAYGCGVLGQFAGEQFAHTCAQIIPLLVQVIN 957
            .:.|.|...|:...|.|.|.|.:......|...|.:..|.:....||:.......::..|..:||
  Fly   698 TKACFPHVHPFMADFFPILGQNLNPDFISVCNNATWAIGEICMKLGEETKQYIRLVLSDLFIIIN 762

  Fly   958 DPKARE--IENISPTENAISAFAKILKYNNSALSNVDELIGVWFSWLPVSEDSEEAAHIYGYLCD 1020
            .|...:  :||.:.|...:.....:     .....:.|.:..|.:.|....|::|....:..:|.
  Fly   763 RPNTPKTLLENTAITIGRLGYVCPV-----EVAPYLPEFVRQWCTSLRHIRDNDEKDSAFRGMCH 822

  Fly  1021 LIEGNHPVILG---------ANNGNLP----RIVSIIAESFCTKVVEAQSATGTRMLTIVKQVES 1072
            :|..|...::.         |:..|.|    :::..|...|.|:|.|....         :.||.
  Fly   823 MITVNPAGVVADFIFFCDAIASWVNPPEDLHQMIQKILHGFKTQVGEENWR---------RFVEQ 878

  Fly  1073 NPEVMAACASTL 1084
            .|..:|...:|:
  Fly   879 FPPTLAERLTTM 890

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Karybeta3NP_524226.1 KAP95 6..>625 CDD:227540 129/703 (18%)
HEAT repeat 129..157 CDD:293787 6/27 (22%)
HEAT repeat 165..216 CDD:293787 10/58 (17%)
HEAT repeat 235..261 CDD:293787 6/32 (19%)
Importin_rep_4 268..358 CDD:408579 25/138 (18%)
HEAT repeat 272..305 CDD:293787 7/32 (22%)
HEAT repeat 357..385 CDD:293787 8/27 (30%)
HEAT repeat 401..429 CDD:293787 6/27 (22%)
HEAT repeat 442..473 CDD:293787 2/30 (7%)
HEAT repeat 485..519 CDD:293787 4/33 (12%)
HEAT repeat 532..565 CDD:293787 4/35 (11%)
Importin_rep_6 766..875 CDD:465881 14/108 (13%)
HEAT repeat 867..894 CDD:293787 5/26 (19%)
HEAT repeat 906..936 CDD:293787 7/29 (24%)
HEAT repeat 947..979 CDD:293787 7/33 (21%)
Importin_rep_5 1007..1059 CDD:465877 13/64 (20%)
TnpoNP_477368.1 KAP95 22..754 CDD:227540 179/1019 (18%)
HEAT repeat 127..155 CDD:293787 7/31 (23%)
HEAT repeat 172..202 CDD:293787 8/33 (24%)
HEAT repeat 213..239 CDD:293787 3/30 (10%)
HEAT repeat 252..281 CDD:293787 5/30 (17%)
HEAT repeat 402..430 CDD:293787 8/27 (30%)
HEAT repeat 442..472 CDD:293787 8/33 (24%)
HEAT repeat 481..510 CDD:293787 9/75 (12%)

Return to query results.
Submit another query.