DRSC/TRiP Functional Genomics Resources

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Protein Alignment Karybeta3 and Tnpo

DIOPT Version :9

Sequence 1:NP_001262259.1 Gene:Karybeta3 / 40581 FlyBaseID:FBgn0087013 Length:1105 Species:Drosophila melanogaster
Sequence 2:NP_001261472.1 Gene:Tnpo / 38721 FlyBaseID:FBgn0024921 Length:893 Species:Drosophila melanogaster


Alignment Length:1182 Identity:211/1182 - (17%)
Similarity:387/1182 - (32%) Gaps:408/1182 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QQLLASL-------LSTDNDVRQQAEE-----AYNNLSRELKVTHLLGNIQNGQQSEEARQMAAV 61
            ||::|.|       .:|...|:.:.||     .:||.     :.::|..::.  :.|..|.::.:
  Fly    11 QQIIAILKESQSPDTATQMAVQMKLEEFNRYPDFNNY-----LIYVLTKLKT--EDEPTRSLSGL 68

  Fly    62 LLR---RLFTT----EFFDFYKGLPAESQNQLLQQILLAVQQEVTPQLRRKICEVVAEVARNLID 119
            :|:   |:..|    |..::.|       ::.||.:     .:.:|.:|..:..::..:|.|   
  Fly    69 ILKNNIRMHGTTLQPEIVEYIK-------HECLQAV-----GDASPLIRATVGILITTIASN--- 118

  Fly   120 EDCNNQWPDILQFLFQCANSPTPQLQESALRIFSSVPSIFGNQEAQYIDL------IKQMLAKSM 178
             ...:.||.:|..|.:..::....:.|.|   ||::..|. ...|:.:|.      :..|:.|.:
  Fly   119 -GGLHNWPQLLPSLCEMLDNQDYNVCEGA---FSALQKIC-EDSAEILDSAALNRPLNIMIPKFL 178

  Fly   179 D--AGSDPEVRVQAVRAVGAFILYHDKENETAIHKHFADMLPRMIHITGETIEAQDDQSLLK--- 238
            :  ..|.|::|..|:..:..||:    ....|:..:....:..:.|::.:     :|..:.|   
  Fly   179 EYFKHSSPKIRSHAIACINQFII----NRSQALMLNIDSFIENLFHLSSD-----EDHEVRKNVC 234

  Fly   239 ----LLIEMTENCPKFLRPQLEFIFEVCMKVFSSQDFEDSWRHLVLEVMVSLAENAPSMIRKRAD 299
                :|:|:..:   .|.|.:..|.|..:  ..:||.::.......|..:||||.  |:.:....
  Fly   235 HGLVMLLEVRMD---RLMPHMSQIIEYML--LRTQDTDEGVALEASEFWLSLAEQ--SICKDVLA 292

  Fly   300 KYIVALIPLILH--------------------MMTDLDDD-----------------ENWSTADV 327
            .|:..|.|:::.                    |:.|.::|                 |..:.|..
  Fly   293 PYLAQLAPVLVRGMRYSEVDIILLKGNVEEDDMVPDREEDIRPRFHKSRAHTIRSTQEGGAGATG 357

  Fly   328 VDDDDHSDNNVIAESSLDR---LACGLGGKIV---------LPLVMNALPVMLGHADWKHRFAAL 380
            .||||..::.:..:|||..   ..|......|         ||:|:..|...|.|.:|..:.:.:
  Fly   358 DDDDDEFEDGMDDDSSLSEWNLRKCSAAALDVLANVFREDCLPVVLPILKETLFHQEWVIKESGV 422

  Fly   381 MAISAIGEGCHKQMEAILDEVMSGVLNFLSDPHPRVRYAACNAIGQMSTDFAQTFEKKFHSQVIP 445
            :|:.||.|||.:.|...|.|::..:::.|||....||...|..:.:    :|.....:.|.|.:.
  Fly   423 LALGAIAEGCMQGMIQHLPELIPYLISCLSDKKALVRSITCWTLSR----YANWVVNQPHDQYLK 483

  Fly   446 GLLSLLDDVENPRVQAHAGAALVNFSEDCPKNILTRYLDGIMAKLETILNSKFKELVEKGNKLVL 510
            .|:                           :.:|.|.||                    .||.|.
  Fly   484 PLM---------------------------EELLKRILD--------------------SNKRVQ 501

  Fly   511 EQVVTTIASVADTCESEFVAYYDRLMPCLKFII---QNANSDDLRMLRGKTIECVSLIGLAVGRE 572
            |...:..|::.:...:|.|.|.:.::..|.|..   |:.|                         
  Fly   502 EAACSAFATLEEEACTELVPYLEYILKTLVFAFSKYQHKN------------------------- 541

  Fly   573 KFIGDAGEVMDMLLVNHTEGGELADDDPQTSYLITAWARMCKILGKQFE--QYLPLVMGPVMRTA 635
                        ||:.:...|.|||.                 :|....  ||:.::|.|:    
  Fly   542 ------------LLILYDAVGTLADS-----------------VGHHLNKPQYIDILMPPL---- 573

  Fly   636 TMKPEVAMLDNDEVEDIDGDVDWSFINLGEQQNFAIRTAGMDDKASACEMLVC---YARELKEGF 697
                            ||   .|:.:.              ||......:|.|   .|..|:.||
  Fly   574 ----------------ID---KWNLLK--------------DDDKDLFPLLECLSSIATALQSGF 605

  Fly   698 AEYAEDVVRQMLPMLKFYFHDGVRTAAAESLPYLLDCAKIKGPQYLEGMWMFICPELLKVIVTEP 762
            ..|.:.|.|:.:.:::       :|...|.|     |.:.:...:         |:..::||.  
  Fly   606 LPYCDPVYRRCISLIE-------QTINQEML-----CKQNQTYDH---------PDKERMIVA-- 647

  Fly   763 EPDVQSELLNSLAKCIETLGPNCLNEDAMKQVLEIINKYVLEHFERADKRLAARNEEDYDDGVEE 827
             .|:.|.|...|.:.||||..|.                                          
  Fly   648 -LDLLSGLAEGLDRHIETLVANS------------------------------------------ 669

  Fly   828 ELAEQDDTDVYILSKIVDITHALFQTNKAQFLPAFEQVAPHFVKLLEPSRPVADRQWGLCVFDDL 892
                             :|.|.|:|        ..:.|.|..            ||....:..||
  Fly   670 -----------------NIMHLLYQ--------CMQDVLPEV------------RQSSFALLGDL 697

  Fly   893 IEFCGPACAPYQQIFTPALVQYVCDKAPEVRQAAAYGCGVLGQFAGEQFAHTCAQIIPLLVQVIN 957
            .:.|.|...|:...|.|.|.|.:......|...|.:..|.:....||:.......::..|..:||
  Fly   698 TKACFPHVHPFMADFFPILGQNLNPDFISVCNNATWAIGEICMKLGEETKQYIRLVLSDLFIIIN 762

  Fly   958 DPKARE--IENISPTENAISAFAKILKYNNSALSNVDELIGVWFSWLPVSEDSEEAAHIYGYLCD 1020
            .|...:  :||.:.|...:.....:     .....:.|.:..|.:.|....|::|....:..:|.
  Fly   763 RPNTPKTLLENTAITIGRLGYVCPV-----EVAPYLPEFVRQWCTSLRHIRDNDEKDSAFRGMCH 822

  Fly  1021 LIEGNHPVILG---------ANNGNLP----RIVSIIAESFCTKVVEAQSATGTRMLTIVKQVES 1072
            :|..|...::.         |:..|.|    :::..|...|.|:|.|....         :.||.
  Fly   823 MITVNPAGVVADFIFFCDAIASWVNPPEDLHQMIQKILHGFKTQVGEENWR---------RFVEQ 878

  Fly  1073 NPEVMAACASTL 1084
            .|..:|...:|:
  Fly   879 FPPTLAERLTTM 890

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Karybeta3NP_001262259.1 HEAT repeat 129..157 CDD:293787 6/27 (22%)
HEAT repeat 165..216 CDD:293787 10/58 (17%)
HEAT repeat 235..261 CDD:293787 6/32 (19%)
HEAT repeat 272..305 CDD:293787 7/32 (22%)
HEAT repeat 357..385 CDD:293787 8/27 (30%)
HEAT_2 364..467 CDD:290374 23/102 (23%)
HEAT_EZ 373..427 CDD:290247 16/53 (30%)
HEAT repeat 401..429 CDD:293787 6/27 (22%)
ARM 405..503 CDD:237987 14/97 (14%)
HEAT repeat 442..473 CDD:293787 2/30 (7%)
HEAT repeat 485..519 CDD:293787 4/33 (12%)
HEAT repeat 532..565 CDD:293787 4/35 (11%)
HEAT repeat 867..894 CDD:293787 5/26 (19%)
HEAT repeat 906..936 CDD:293787 7/29 (24%)
HEAT repeat 947..979 CDD:293787 7/33 (21%)
TnpoNP_001261472.1 IBN_N 32..99 CDD:281761 14/85 (16%)
ARM 127..234 CDD:237987 21/119 (18%)
HEAT repeat 127..155 CDD:293787 7/31 (23%)
HEAT repeat 172..202 CDD:293787 8/33 (24%)
HEAT repeat 213..239 CDD:293787 3/30 (10%)
HEAT repeat 252..281 CDD:293787 5/30 (17%)
HEAT_2 399..507 CDD:290374 34/158 (22%)
HEAT repeat 402..430 CDD:293787 8/27 (30%)
HEAT_EZ 415..469 CDD:290247 16/57 (28%)
HEAT repeat 442..472 CDD:293787 8/33 (24%)
HEAT repeat 481..510 CDD:293787 9/75 (12%)
HEAT repeat 670..702 CDD:293787 10/51 (20%)
HEAT repeat 711..737 CDD:293787 6/25 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438713
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10527
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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