DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and Asic4

DIOPT Version :10

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_071570.2 Gene:Asic4 / 63882 RGDID:621068 Length:539 Species:Rattus norvegicus


Alignment Length:561 Identity:116/561 - (20%)
Similarity:196/561 - (34%) Gaps:163/561 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 YCRNTSIHGV-QYLGEQERPFRERIFWLFVFLIS----IYGCSTLIQSAYTKWTETPVIVSFAEK 98
            :...:::||: :..|......| |..|:...|.|    :|..::|.:...|:    |.:|:. :.
  Rat    45 FASTSTLHGLGRACGPGPHGLR-RTLWVLALLTSLAAFLYQAASLARGYLTR----PHLVAM-DP 103

  Fly    99 STPVWNIPFPAVTVCSETKRVLKQKGKETTYADLYSQFSEDMRASRVFRPENVSALEMEEFRTLL 163
            :.|.....|||||:|:..:                            ||...:|..:      :.
  Rat   104 AAPAPVAGFPAVTLCNINR----------------------------FRHSALSDAD------IF 134

  Fly   164 HVCNTQII---EEDIPLIAG---DDLDYFDVLQRMLPQFDRYFFYCRWLSRFGECE-TFFRKTLT 221
            |:.|...:   :.|....||   .:.|..|:|.|...|.......|.:...  .|. :.|....|
  Rat   135 HLANLTGLPPKDRDGHRAAGLRYPEPDMVDILNRTGHQLADMLKSCNFSGH--HCSASNFSVVYT 197

  Fly   222 EEGICYTFNGLRATEIYRDDTYQYQHSGEPLEMENISSQHTAWTLETGYALDSDVETFPARVLSA 286
            ..|.|||||                  .:|                        ..:.|:|  :.
  Rat   198 RYGKCYTFN------------------ADP------------------------QSSLPSR--AG 218

  Fly   287 GARSGIFLALQSFKQEVDYACRGPV------QGFKVGKFENVLLHAPDDVPQVSKQFVRIPMGKE 345
            |..||:.:.|..  |:.:|.   |:      ..|:.|  ..|.:|:.::.|.:.:....:..|.:
  Rat   219 GMGSGLEIMLDI--QQEEYL---PIWRETNETSFEAG--IRVQIHSQEEPPYIHQLGFGVSPGFQ 276

  Fly   346 VLIAVKPNMITMSSGIAEYHP-----VRRQCFLSHERSLRFFKVYTESNCQLECLANFTLTKCGC 405
            ..::.:...:|       |.|     .|.:..| .|..|:.:..|:.|.|:|.|.....|.:|.|
  Rat   277 TFVSCQEQRLT-------YLPQPWGNCRAESKL-REPELQGYSAYSVSACRLRCEKEAVLQRCHC 333

  Fly   406 VKFSMPRNVDMPVCGED-KIHCYDRAERELLVREFKRVKALNAGRENSRSVESACNCMPACTSLV 469
            ....||.|  ..:|..: .|.|.|..           :.:|..|.      |..|.|...|....
  Rat   334 RMVHMPGN--ETICPPNIYIECADHT-----------LDSLGGGS------EGPCFCPTPCNLTR 379

  Fly   470 YNTEISQANFDLEEMLVAEGDTEFL-------KEYPGSQMSRLSIYFKQSQFITSKRSE---LYG 524
            |..|||...      :...|...:|       :.|.......|.::|   :.:||:..|   .||
  Rat   380 YGKEISMVK------IPNRGSARYLARKYNRNETYIRENFLVLDVFF---EALTSEAMEQRAAYG 435

  Fly   525 MTEFLANCGGIFGLFMGFSILSLVEMIYHFTLRLFTNLKRL 565
            ::..|.:.||..|||:|.|||:|:|::.:.....:..|||:
  Rat   436 LSALLGDLGGQMGLFIGASILTLLEILDYIYEVSWDRLKRV 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:459966 113/546 (21%)
Asic4NP_071570.2 ENaC 40..488 CDD:273304 116/561 (21%)
GAS motif, ion selectivity filter. /evidence=ECO:0000250|UniProtKB:P78348 452..454 1/1 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 501..531
Blue background indicates that the domain is not in the aligned region.

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