DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rpk and SCNN1G

DIOPT Version :9

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_001030.2 Gene:SCNN1G / 6340 HGNCID:10602 Length:649 Species:Homo sapiens


Alignment Length:624 Identity:122/624 - (19%)
Similarity:221/624 - (35%) Gaps:190/624 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 YCRNTSIHGVQYLGEQERPFRERIFWLFVFLISI----YGCSTLIQSAYTKWTETPVIVSFAEKS 99
            ||.||:.||.:.:.......| |:.|:...|.::    :.|:.|:.|.||  ....:.|.|.:  
Human    32 YCLNTNTHGCRRIVVSRGRLR-RLLWIGFTLTAVALILWQCALLVFSFYT--VSVSIKVHFRK-- 91

  Fly   100 TPVWNIPFPAVTVCS------------------ETKRVLK--------------------QKGKE 126
                 :.|||||:|:                  ||:..||                    .:||:
Human    92 -----LDFPAVTICNINPYKYSTVRHLLADLEQETREALKSLYGFPESRKRREAESWNSVSEGKQ 151

  Fly   127 TTYAD-----LYSQFSEDMRASRVF--RPENVSALEMEEFRTLLHVCNTQIIEEDIPLIAGDDLD 184
            ..::.     ::.| .|..:|...|  |...|....:.:...::|:.:.|::  ...|.:.|..|
Human   152 PRFSHRIPLLIFDQ-DEKGKARDFFTGRKRKVGGSIIHKASNVMHIESKQVV--GFQLCSNDTSD 213

  Fly   185 YFDVLQRMLPQFDRYFFYCRWLSRFGECETFFRKTLTEEGICYTF-NGLRATEIYRDDTYQYQHS 248
                                       |.|            ||| :|:.|.:.:....|....:
Human   214 ---------------------------CAT------------YTFSSGINAIQEWYKLHYMNIMA 239

  Fly   249 GEPLEMENISSQHTAWTLET-----GYALDS------------DVETFPAR----VLS---AGAR 289
            ..||| :.|:..::|..|..     |.:.|:            :..||..|    :||   .|:.
Human   240 QVPLE-KKINMSYSAEELLVTCFFDGVSCDARNFTLFHHPMHGNCYTFNNRENETILSTSMGGSE 303

  Fly   290 SGIFLALQSFKQEVDYACRGPVQGFKVGKFENVLLHAPDDVPQVSKQFVRIPMGKEVLIAVKPNM 354
            .|:.:.|  :..|.:|   .|......|  ..|::|..|:.|.|.      .:|.|:..|:..::
Human   304 YGLQVIL--YINEEEY---NPFLVSSTG--AKVIIHRQDEYPFVE------DVGTEIETAMVTSI 355

  Fly   355 ---ITMSSGIAEYH----------PVRRQCFLSHERSLRFFKVYTESNCQLECLANFTLTKCGCV 406
               :|.|..::|.:          |:|.          .:...|:...|...|.....:.||||.
Human   356 GMHLTESFKLSEPYSQCTEDGSDVPIRN----------IYNAAYSLQICLHSCFQTKMVEKCGCA 410

  Fly   407 KFSMPRNVDMPVCGEDK----IHCYDRAERELLVREFKRVKALNAGRENSRSVESACNCMPACTS 467
            ::|.|.......|...:    ::||.:..|..:..|.           ..:||     |..||:.
Human   411 QYSQPLPPAANYCNYQQHPNWMYCYYQLHRAFVQEEL-----------GCQSV-----CKEACSF 459

  Fly   468 LVYNTEISQANFD-------LEEMLVAEGDTEFLKEYPGSQMSRLSIYFKQSQFITSKRSELYGM 525
            ..:....|.|.:.       |..:|..:...:..|:...:.:::|.|::|.....:...|....:
Human   460 KEWTLTTSLAQWPSVVSEKWLLPVLTWDQGRQVNKKLNKTDLAKLLIFYKDLNQRSIMESPANSI 524

  Fly   526 TEFLANCGGIFGLFMGFSILSLVEMIYHFTLRLFTNLKR 564
            ...|:|.||..||:|..|::.::|:|..|.:..|:.:.|
Human   525 EMLLSNFGGQLGLWMSCSVVCVIEIIEVFFIDFFSIIAR 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:279230 118/610 (19%)
SCNN1GNP_001030.2 ENaC 24..630 CDD:273304 122/624 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100105
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.720

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