DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and SCNN1D

DIOPT Version :9

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_001123885.2 Gene:SCNN1D / 6339 HGNCID:10601 Length:802 Species:Homo sapiens


Alignment Length:581 Identity:108/581 - (18%)
Similarity:207/581 - (35%) Gaps:139/581 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 EGFI---TTYHE----YCRNTSIHGVQYLGEQERPFRERIFWLFVFLISIYGCSTLIQSAYTKWT 87
            ||.:   .::.|    :|.|.:|||...|........:...|..:.|.::......:...:.:..
Human   211 EGLVELPASFRELLTFFCTNATIHGAIRLVCSRGNRLKTTSWGLLSLGALVALCWQLGLLFERHW 275

  Fly    88 ETPVIVSFAEKSTPVWNIPFPAVTVCSETKR----VLKQKGKETTYADLYSQFSEDMRASRVFRP 148
            ..||:::.:..|.   ....|.||:|....|    ||:       :.:|..:|:.          
Human   276 HRPVLMAVSVHSE---RKLLPLVTLCDGNPRRPSPVLR-------HLELLDEFAR---------- 320

  Fly   149 ENVSAL---EMEEFRTLLHVCNTQIIEEDIPLIAGDDLDYFDVLQRMLPQFDRY---FFYCRWLS 207
            ||:.:|   .:.:.|..|   :..:...:.|.    .||....|||:.....|.   |..|.  |
Human   321 ENIDSLYNVNLSKGRAAL---SATVPRHEPPF----HLDREIRLQRLSHSGSRVRVGFRLCN--S 376

  Fly   208 RFGECETFFRKTLTEEGICYTFNGLRATEIYRDDTYQYQHSGEPLEM------ENISSQHTAWTL 266
            ..|:|  |:|.        || :|:.|.:    |.|.: |..:.|.:      ::..||...:.|
Human   377 TGGDC--FYRG--------YT-SGVAAVQ----DWYHF-HYVDILALLPAAWEDSHGSQDGHFVL 425

  Fly   267 ETGY-ALDSDVETFPA-------------RVLSA---GARSGIFLALQSFKQEVDYACRGPVQGF 314
            ...| .||.....|..             .|.:|   |...|:.|.|: .:|:........:.|.
Human   426 SCSYDGLDCQARQFRTFHHPTYGSCYTVDGVWTAQRPGITHGVGLVLR-VEQQPHLPLLSTLAGI 489

  Fly   315 KVGKFENVLLHAPDDVPQVSKQFVRIPMGKEVLIAVKPNMI-----------TMSSGIAEYHPVR 368
            :      |::|..:..|.:......:..|.|..|:::.:.:           ....|:       
Human   490 R------VMVHGRNHTPFLGHHSFSVRPGTEATISIREDEVHRLGSPYGHCTAGGEGV------- 541

  Fly   369 RQCFLSHERSLRFFKVYTESNCQLECLANFTLTKCGCVKFSMPRNVDMPVCGEDKI----HCYDR 429
             :..|.|..|      ||...|.:.|.....:..|.|..:..|.......|...:.    ||:.|
Human   542 -EVELLHNTS------YTRQACLVSCFQQLMVETCSCGYYLHPLPAGAEYCSSARHPAWGHCFYR 599

  Fly   430 AERELLVREFKRV----KALNAGRENSRSVESACNCMPACTSLVYNTEISQANFDLEEMLVAEGD 490
            ..::|   |..|:    :.....||::..:.:..:..|:..|         |.:.|..:  .|..
Human   600 LYQDL---ETHRLPCTSRCPRPCRESAFKLSTGTSRWPSAKS---------AGWTLATL--GEQG 650

  Fly   491 TEFLKEYPGSQMSRLSIYFKQSQFITSKRSELYGMTEFLANCGGIFGLFMGFSILSLVEMI 551
            .........|.:::::|.:::..:.:.:.:.:|.:.:.|:..|.:..|:.|.|:|||:|::
Human   651 LPHQSHRQRSSLAKINIVYQELNYRSVEEAPVYSVPQLLSAMGSLCSLWFGASVLSLLELL 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:279230 105/565 (19%)
SCNN1DNP_001123885.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..211 108/581 (19%)
ENaC 219..784 CDD:273304 106/573 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 738..777
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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