DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and SCNN1B

DIOPT Version :9

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:XP_016879014.1 Gene:SCNN1B / 6338 HGNCID:10600 Length:659 Species:Homo sapiens


Alignment Length:636 Identity:144/636 - (22%)
Similarity:212/636 - (33%) Gaps:199/636 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 TYHE----YCRNTSIHGVQYLGEQERPFRERIFWLFVFLISIYGC---STLIQSAYTKWTETPVI 92
            ||.|    ||.||:.||.:.: ..|.|.::.:::|...|.:...|   ...|:: |..| |..|.
Human    40 TYKELLVWYCDNTNTHGPKRI-ICEGPKKKAMWFLLTLLFAALVCWQWGIFIRT-YLSW-EVSVS 101

  Fly    93 VSFAEKSTPVWNIPFPAVTVC-------SETKRVLKQKGKETTYADLYSQFSEDMRA--SRVFRP 148
            :|...|:     :.|||||:|       |:.|.:||         ||    .|.|.|  .|:..|
Human   102 LSVGFKT-----MDFPAVTICNASPFKYSKIKHLLK---------DL----DELMEAVLERILAP 148

  Fly   149 ENVSALEMEEFRTLLHVCNTQIIEEDI----PLIAGDDLDYFDVLQRMLPQFDRYFFYCRWLSRF 209
            |            |.|...|:.:...|    ||:..|               :|...:...|..|
Human   149 E------------LSHANATRNLNFSIWNHTPLVLID---------------ERNPHHPMVLDLF 186

  Fly   210 GECETFFRKTLTEEGIC------------------YTFNG-------------LRATEIY----R 239
            |:.......:...|.||                  .||..             |:||.|:    :
Human   187 GDNHNGLTSSSASEKICNAHGCKMAMRLCSLNRTQCTFRNFTSATQALTEWYILQATNIFAQVPQ 251

  Fly   240 DDTYQYQHSG-----------EPLEMENISS---QHTA------WTLETGYALDSDVETFPARVL 284
            .:..:..:.|           ||....|.:|   .|..      |.: |..||.|         .
Human   252 QELVEMSYPGEQMILACLFGAEPCNYRNFTSIFYPHYGNCYIFNWGM-TEKALPS---------A 306

  Fly   285 SAGARSGIFLALQSFKQEVDYACRGPVQGFKVGKFENVLLHAPDDVPQVSKQFVRIPMGKEVLIA 349
            :.|...|:.|.| ...|| ||.   |......|  ..::||.....|.:..:.:....|.|..|.
Human   307 NPGTEFGLKLIL-DIGQE-DYV---PFLASTAG--VRLMLHEQRSYPFIRDEGIYAMSGTETSIG 364

  Fly   350 VKPNMITMSSGIAE-YHP-------VRRQCFLSHERSLRFFKVYTESNCQLECLANFTLTKCGC- 405
            |   ::.....:.| |.|       |..|.|.|.     :...|:...|...|..:..:..|.| 
Human   365 V---LVDKLQRMGEPYSPCTVNGSEVPVQNFYSD-----YNTTYSIQACLRSCFQDHMIRNCNCG 421

  Fly   406 -VKFSMPR------NVDMPVCGEDKIHCYDRAERELLVREFKRVKALNAGRENSRSVESAC--NC 461
             ..:.:||      |.|.|    |..|||...:..:..||                   .|  .|
Human   422 HYLYPLPRGEKYCNNRDFP----DWAHCYSDLQMSVAQRE-------------------TCIGMC 463

  Fly   462 MPACTSLVYNTEISQANFDLE-------EMLVAEGDTEFLKEYPGSQMSRLSIYFKQSQFITSKR 519
            ..:|....|...||.|::..|       .:|..|.|...........:.:|:|||::..:.|.:.
Human   464 KESCNDTQYKMTISMADWPSEASEDWIFHVLSQERDQSTNITLSRKGIVKLNIYFQEFNYRTIEE 528

  Fly   520 SELYGMTEFLANCGGIFGLFMGFSILSLV---EMIYHFTLRLFTNLKRLVK 567
            |....:...|:|.||.||.:||.|:|.|:   |:|..|.......|..|.|
Human   529 SAANNIVWLLSNLGGQFGFWMGGSVLCLIEFGEIIIDFVWITIIKLVALAK 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:279230 136/611 (22%)
SCNN1BXP_016879014.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100105
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.720

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