DRSC/TRiP Functional Genomics Resources

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Protein Alignment rpk and LOC4577657

DIOPT Version :10

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:XP_061512609.1 Gene:LOC4577657 / 4577657 VectorBaseID:AGAMI1_010571 Length:558 Species:Anopheles gambiae


Alignment Length:549 Identity:208/549 - (37%)
Similarity:302/549 - (55%) Gaps:69/549 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 YHEYCRNTSIHGVQYLGEQERPFRERIFWLFVFLISIYGCSTLIQSAYTKWTETPVIVSFAEKST 100
            :.|||.|:|||||:|....||...||.:||.|||:|:.||..:|...|.||.:.|:||:|:||:|
Mosquito    32 FREYCANSSIHGVRYFDRNERTVCERFWWLVVFLLSMLGCGVMIHKTYVKWNQVPIIVTFSEKTT 96

  Fly   101 PVWNIPFPAVTVCSETKRVLKQKGKETTYADLYSQFSEDMRASRVFRPENVSALEMEEFRTLLHV 165
            |||:|.|||:|:|.||| |..:|...|  |::.:..:...|.:.....|:|..|     :.:..:
Mosquito    97 PVWDIHFPAITICPETK-VSAEKLNIT--AEMNALVAAVERGNGSSERESVPQL-----KAVSQL 153

  Fly   166 CNT--QIIEEDIPLIAGDDLDYFDVLQRMLPQFDRYFFYCRWLSRFGECETFFRKTLTEEGICYT 228
            ||.  |:....:..:.|.:.|....|:.|..:.|.....|::.:.:..||....:|::|||||||
Mosquito   154 CNMLFQLEYHWLHELNGSEDDLVGTLKDMSLRRDETVVMCQYGNTYDACEDRLTETVSEEGICYT 218

  Fly   229 FNGLRATEIYRDDTYQYQHSGEPLEMENISSQHTAWTLETGYALDSDVETF-PARVLSAGARSGI 292
            ||.:...||:|.                 ||.||.:....|:....:.:.. |.....||...|:
Mosquito   219 FNMISEREIFRK-----------------SSLHTEYNYMEGWFNSKEHQPLAPVFARGAGLHDGL 266

  Fly   293 FLALQSFKQEVDYACRGPVQGFKVGKFENVLLHAPDDVPQVSKQFVRIPMGKEVLIAVKPNMITM 357
            .|.|:..:::.||.|.|..||:|      :::|..|:.||||.:.:|||...|:.||:||.|:..
Mosquito   267 TLYLRHMQEDTDYLCTGFSQGYK------LMIHGTDEYPQVSMRNMRIPFSHEISIALKPQMMVT 325

  Fly   358 SSGIAEYHPVRRQCFLSHERSLRFFKVYTESNCQLECLANFTLTKCGCVKFSMPRNVDMPVCGED 422
            |...|::...:||||.:.||.|||||:|.:.||:||||:|.|...||||:|||||:.|..||...
Mosquito   326 SQSAADFSWEKRQCFFNDERHLRFFKLYNQDNCELECLSNVTKALCGCVRFSMPRSNDTTVCPLS 390

  Fly   423 KIHCYDRAERELLV---------REFKRVKALNAGRENSRSVESACNCMPACTSLVYNTEISQAN 478
            ...|..||:..|..         .||:..|.:|           :|||:|||:|:.|:.|.:|.:
Mosquito   391 MWQCMYRAKWFLRPSNNSRLPPNEEFEITKIVN-----------SCNCLPACSSVYYDVETTQTS 444

  Fly   479 FDLEEMLVA-------EGDTEFLKEYPGSQMSRLSIYFKQSQFITSKRSELYGMTEFLANCGGIF 536
            .|:|:.|:|       :.|..|:        :.::||||:|.|||||||||||..:|||||||:.
Mosquito   445 LDMEKFLLATNELMGDDSDKFFI--------TTIAIYFKESYFITSKRSELYGWVDFLANCGGLL 501

  Fly   537 GLFMGFSILSLVEMIYHFTLRLFTNLKRL 565
            |||||.|||||:|:.|..|:|.|:..|.|
Mosquito   502 GLFMGVSILSLLEICYFITIRPFSLRKTL 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:459966 201/531 (38%)
LOC4577657XP_061512609.1 None

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