DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rpk and ppk30

DIOPT Version :9

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_001263076.1 Gene:ppk30 / 43487 FlyBaseID:FBgn0039677 Length:457 Species:Drosophila melanogaster


Alignment Length:515 Identity:105/515 - (20%)
Similarity:177/515 - (34%) Gaps:146/515 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LISIYGCSTLIQSAYTKWTETPVIVSFAEKSTPVWNIPFPAVTVCSETKRVLKQKGKETTYADLY 133
            |.::|......:..:..|.:|    |.......|..|.|||||:......:||.:.....|..:.
  Fly    51 LATVYVSILSSERYFYYWVQT----SIERTDMHVSEIDFPAVTIIPINLSILKAEKLSKAYNLVQ 111

  Fly   134 SQFSEDMRASRVFRPENVSALEMEEFRTLLHVCNTQIIEEDIPLIAGDDLDYFDVLQRMLPQFDR 198
            |...:...::|:.........|:|.:       |.|               .:.:.|.:......
  Fly   112 SVVWQTPMSARLTDENFTEFSELENW-------NAQ---------------SWGIYQALQMNCQH 154

  Fly   199 YFFYCRWLSRFGECETFFRKTLTEEGICYTFNGLRATEIYRDDTYQYQHSGEPLEMENISSQHTA 263
            :|..|:|..:...|...||.|.|..|..:.||.|                        :||... 
  Fly   155 FFTECQWRRKAMNCCDLFRPTKTFNGFAFEFNSL------------------------VSSGRD- 194

  Fly   264 WTLETGYALDSDVETFPARVLSAGARSGIFLALQSFKQEVDYACRGPVQGFKVGKFENVLLHAPD 328
                         ||:|..|.|.|:.||:.:.:   |::         ||........|::|.|.
  Fly   195 -------------ETWPWSVASCGSYSGLNVKI---KRQ---------QGLYTLNTMGVIVHEPT 234

  Fly   329 DVPQVSKQFVRIPMGKE--VLIAVKPNMITMSSGIAEYHPVR-RQCFLSHE----RSLRFFKVYT 386
            .:..:|     |....|  :::.|:|...|....: ...||: |:|:..:|    :|        
  Fly   235 QLLGMS-----IDYSSEDRIVVPVEPLHFTAELDV-RARPVQMRRCYFENEIPTGKS-------- 285

  Fly   387 ESNCQLECLANFTLTKCGCVKFSMPRNVDMPV--------------------CGEDKIHCYDRAE 431
            .|.|..:|..|:.::||.|       ::::||                    ||...:.|:::..
  Fly   286 RSECIYKCHVNYIISKCNC-------SLELPVKATQDEDNIAAAKESNGRRICGVKDLACFNQHR 343

  Fly   432 RELLVREFKRVKALNAGRENSRSVESACNCMPACTSLVYNTEISQANFDLEEMLVAEGDTEFLKE 496
            ..|    |.....:...|:|..|... |.|.|.|....|:|............|.|         
  Fly   344 LSL----FSMSNIIEESRDNVFSTVD-CGCFPQCGHTQYHTSTYTEKMSAHTNLAA--------- 394

  Fly   497 YPGSQMSRLSIYFKQSQFITSKRSEL-YGMTEFLANCGGIFGLFMGFSILSLV-EMIYHF 554
                 ...:.:|| |.:.:.|.||.| :.:.:.:.:.|||.||.||.|:|..: |::..|
  Fly   395 -----AIEIDVYF-QEETLFSYRSMLRFTLIDLMVSYGGIAGLIMGISVLGCINELLDRF 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:279230 104/511 (20%)
ppk30NP_001263076.1 ASC 47..446 CDD:279230 104/511 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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