DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rpk and ppk20

DIOPT Version :9

Sequence 1:NP_001246909.1 Gene:rpk / 40580 FlyBaseID:FBgn0022981 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_651705.2 Gene:ppk20 / 43486 FlyBaseID:FBgn0039676 Length:587 Species:Drosophila melanogaster


Alignment Length:598 Identity:128/598 - (21%)
Similarity:213/598 - (35%) Gaps:169/598 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 YHEYCRNTSIHGVQYLGEQERPFRE----------------------RIFWLFVFLISIYGCS-- 76
            :..||..::||.|:||.:......|                      ||.|..:.:||| |.|  
  Fly    31 FRSYCEKSTIHCVRYLYDSHLHNLERFVVYPLFISTFNFKLYIIIVFRIIWSMLLIISI-GLSFF 94

  Fly    77 --TLIQSAYTKWTETPVIVSFAEKSTPVWNIPFPAVTVCSETKRVLKQKGKETTYADLYSQFSED 139
              .|:...:.......|:   .:...||:.:|||||.:|::.:                ..:::.
  Fly    95 FYLLLSERFVSQKLQTVV---HDPQFPVFLVPFPAVGICTDNR----------------INWNKL 140

  Fly   140 MRASRVFRPENVSALEMEEFRTLL----------HVCNTQIIEED----IPLIAGDDLDYFDVLQ 190
            ..|...|.|.|.|...:|.|..|:          ::.:...:|:|    :..:...:|..|..||
  Fly   141 EAAKEQFLPTNASVELVESFTVLVSRMETLRFGSYLSSLAELEDDNLEAVGFVNLTELAIFMTLQ 205

  Fly   191 ---RMLPQFDRYFFYCRWLSRFGECETFFRKTLTEEGICYTFNGLRATEIYRDDTYQYQHSGEPL 252
               .|:|:      .|.|.|....|..:|....||.|.|..||    :|:........|..|   
  Fly   206 CSDIMVPK------SCLWRSSSFNCCEYFVLEKTEFGFCLVFN----SEVSPRSKAIKQKEG--- 257

  Fly   253 EMENISSQHTAWTLETGYALDSDVETFPARVLSAGARSGIFLAL---QSFKQEVDYACRGPVQGF 314
              .|...:|.|                     .||..:|:...|   :||::....|        
  Fly   258 --NNFYPRHNA---------------------KAGQSTGLNFDLILNESFRRPDSQA-------- 291

  Fly   315 KVGKFENV---LLHAPDDVPQVSKQFVRIPMGKEVLIAVKPNMITMSSGIAEYHPVRRQCFLSHE 376
                ..||   :..|||   |::.....|....|..:.|:|.:....:......|.||.|..:.|
  Fly   292 ----NNNVYVSICQAPD---QLNNVVYSITQNTETYVTVRPGLTWTDNTTRSIPPERRNCLFADE 349

  Fly   377 R--------SLRFFKVYTESNCQLECLANFTLTKCGCVKFSMP----RNVDMPVCGEDKIHC--- 426
            :        :..|.|.:..|||...|..::.:..|.|   |:|    .|..:|.|....:.|   
  Fly   350 QGELDANDSAKNFGKPFQLSNCLNRCHESYLIQLCNC---SLPIFFLYNHRVPDCNAVSLRCLAR 411

  Fly   427 ------YD-RAERELLVREFKRVKALNAGRENSRSVESACNCMPACTSLVYNTEISQANFDLEEM 484
                  || |.:.:.|   |...|           :...|:|:..|..|.|.|..:.......: 
  Fly   412 HNDIFSYDKRRDEDAL---FSATK-----------LGMTCSCLVDCYLLDYYTSTTTLPLSAHK- 461

  Fly   485 LVAEGDTEFLKEYPGSQMSRLSIYFKQSQFITSKRSELYGMTEFLANCGGIFGLFMGFSILSLVE 549
                     |.:.|..::.|:.::::.......:.|..:.:.:.:||.||||||.:|.|::|..|
  Fly   462 ---------LPKDPHQKLFRVDVHYQVETTPLYRTSLEFTIIDLIANLGGIFGLCLGASMVSAFE 517

  Fly   550 MIYHFTLRLFTNL 562
            :||:.|:.|..:|
  Fly   518 LIYYLTVGLAMHL 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rpkNP_001246909.1 ASC 39..552 CDD:279230 123/583 (21%)
ppk20NP_651705.2 ASC 34..521 CDD:279230 124/584 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D112386at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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